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. Author manuscript; available in PMC: 2010 Nov 24.
Published in final edited form as: Chembiochem. 2009 Sep 21;10(14):2394–2400. doi: 10.1002/cbic.200900413

Table 4.

Kinetic data for unnatural base pair and mispair extension via dCTP incorporation with dMMO2 derivatives in the template.[a]

5′-d(TAATACGACTCACTATAGGGAGAY
3′-d(ATTATGCTGAGTGATATCCCTCTXGCTAGGTTACGGCAGGATCGC

X Y kcat (min−1) KM (μM) kcat/KM (M−1 min−1)
dMMO2 d5SICS[b] 3.8 ± 0.3 5.7 ± 1.2 6.7 × 105
dMMO2[b] 0.87 ± 0.28 160 ± 47 5.3 × 103
dA[b] 8.7 ± 0.9 190 ± 17 4.6 × 104
dG[b] nd[c] nd[c] <1.0 × 103
dC[b] 3.9 ± 1.32 3.2 ± 0.23 1.2 × 106
dT[b] 6.2 ± 0.8 9.4 ± 1.0 6.6 × 105
d5FM d5SICS 3.2 ± 0.7 1.4 ± 0.3 2.3 × 106
d5FM 2.6 ± 0.39 99 ± 17.9 2.6 × 104
dA 5.5 ± 0.08 17 ± 1.6 3.2 × 105
dG nd[c] nd[c] <1.0 × 103
dC 2.4 ± 0.23 1.2 ± 0.10 2.0 × 106
dT 4.1 ± 0.19 2.1 ± 0.17 2.0 × 106
d5ClM d5SICS 7.8 ± 1.47 1.5 ± 0.37 5.3 × 106
d5ClM 2.7 ± 0.19 80 ± 14.5 3.4 × 104
dA 7.0 ± 0.19 7.3 ± 3.1 9.6 × 105
dG nd[c] nd[c] <1.0 × 103
dC 2.8 ± 0.34 0.54 ± 0.14 5.2 × 106
dT 4.2 ± 0.79 0.95 ± 0.10 4.4 × 106
d5BrM d5SICS 6.8 ± 2.0 2.0 ± 0.18 3.4 × 106
d5BrM 1.5 ± 0.1 46 ± 8.3 3.2 × 104
dA 5.6 ± 0.2 8.5 ± 1.1 6.5 × 105
dG nd[c] nd[c] <1.0 × 103
dC 2.5 ± 0.07 2.4 ± 0.02 5.9 × 106
dT 3.6 ± 0.1 0.85 ± 0.07 4.3 × 106
d5IM d5SICS 4.1 ± 1.6 1.1 ± 0.3 3.6 × 106
d5IM 0.91 ± 0.18 120 ± 13 7.4 × 103
dA 5.9 ± 0.9 12 ± 0.3 4.9 × 105
dG nd[c] nd[c] <1.0 × 103
dC 1.8 ± 0.02 0.30 ± 0.03 5.9 × 106
dT 3.1 ± 0.4 0.58 ± 0.05 5.2 × 106
d5MeM d5SICS 4.6 ± 0.5 2.1 ± 0.05 2.2 × 106
d5MeM 3.9 ± 0.12 59 ± 11 6.5 × 104
dA 3.8 ± 1.0 18 ± 5.7 2.2 × 105
dG nd[c] nd[c] <1.0 × 103
dC 2.4 ± 0.08 0.80 ± 0.07 3.0 × 106
dT 5.2 ± 1.4 4.8 ± 1.9 1.1 × 106
d5PrM d5SICS 7.5 ± 2.81 5.8 ± 2.5 1.3 × 106
d5PrM 0.98 ± 0.17 230 ±150 4.2 × 103
dA 5.2 ± 0.09 21 ± 6.6 2.4 × 105
dG nd[c] nd[c] <1.0 × 103
dC 2.9 ± 0.25 0.67 ± 0.03 4.3 × 106
dT 2.7 ± 0.37 1.8 ± 0.8 1.2 × 106
[a]

see Experimental section for details.

[b]

Reference 5.

[c]

Reaction was too inefficient for kcat and KM to be determined independently.