Table 7.
Parameter estimates (not including mixing proportions) from the examples analyzed. The last column indicates the number of functional categories in GO and KEGG having at least five annotated genes, which were used in the development of Figure 4. KEGG was not available for GDS1937, and so this data set was not used in Figure 4
| Data set | α | α0 | ν0 | # GO/KEGG |
|---|---|---|---|---|
| Edwards | 113 | 1 | 586.5 | |
| GDS2323 | 14 | 1 | 119.1 | 3849/184 |
| GDS1802 | 17 | 1 | 46.8 | 3619/182 |
| GDS2043 | 22 | 1 | 47.7 | 3619/182 |
| GDS2360 | 8 | 1 | 15.8 | 3258/175 |
| GDS599 | 12 | 1 | 0.01 | 3180/159 |
| GDS812 | 5 | 1 | 15.4 | 3258/175 |
| GDS1937 | 6 | 1 | 20.5 | NA |
| GDS568 | 10 | 1 | 37.1 | 3258/175 |
| GDS2431 | 4 | 1 | 67.6 | 4085/188 |
| GDS587 | 8 | 1 | 9999.2 | 1876/127 |
| GDS586 | 13 | 1 | 4566.2 | 3258/175 |