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. 2010 Nov 24;6(11):e1001016. doi: 10.1371/journal.pcbi.1001016

Table 1. BP mapping in long AGEZ-containing introns.

Gene name Exon/length (nt) AGEZ length (nt) Candidates in AGEZ (N) BP position (nt) BP sequence MM1 ranking SVM ranking
MBNL1 6/54 173 11 −141 cgatgAttt 5 2
−144 ttccgAtga * - -
8/36 134 13 −51 ttttaAttc 6 4
−64 gtgtgAtgg 3 2
9/95 224 14 −31 gctacActc * - -
−41 tctgtAtgt * - -
−229 tggtaAcaa 1 1
CLK1 4/91 235 17 −224 atctgAaaa 9 4
−229 atcttAtct 14 10
CLK3 4/97 207 11 −196 tcttgAcgt 3 2
HTR4 3/201 149 5 −143 atgtgActt 3 1
−151 cactaAgca 1 2
4/154 291 11 −27 tgcctAtgc * - -
−33 tgcccAtgc * - -
−72 ctctcAtat 3 5
−267 taatcActt 4 1
−273 attatAtaa * - -
5/569 221 10 −26 tcctcAttt 3 9
−39 tttttAcct 7 10
−213 tgctgAtaa 2 1
g/76 101 6 −31 ccctcAtct 2 2
−86 tactaAtct 1 1

*non-canonical BP.