Skip to main content
. 2010 Nov 12;10:352. doi: 10.1186/1471-2148-10-352

Table 5.

Results from topology tests

Templeton Winning-sites Approxiomately Unbiased Shimodaira-Hasegawa
topology Length P P P P
tree 1 13123 0.2971 0.4049 1.000 0.994
tree 2 13118 5e-004 0.006

Key: Maximum Parsimony: Templeton- and Winning-sites tests. Tree 1: optimal tree from RAxML search (Figure 2), tree 2: optimal tree from MP ratchet search, where Byblidaceae appear as sister to Lentibulariaceae. P = Approximate probability of getting a more extreme test statistic under the null hypothesis of no difference between the two trees (two-tailed test). The shortest tree (tree 2) is not significantly different from the ML topology (tree 1, Figure 2). Maximum Likelihood: Approximatly Unbiased- and Shimodaira-Hasegawa tests. The ML topology (tree 1, Figure 2) is significantly different from and more likely than the MP alternative (tree 2).