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. 2010 Nov 1;107(46):20033–20038. doi: 10.1073/pnas.1007246107

Table 1.

Dinoflagellate nucleosome-related genes retrieved from current e-cDNAs and representatives from existing DinoEST

Dinoflagellate species Accession no. Hit protein Hit accession number E value Similarity, %
Uncultured (e-cDNA) GU555462 Histone H2A.X AAX49407 5e−50 82
Crypthecodinium cohnii EB086331* Histone H2A.X AAX49407 3e−29 80
Amphidinium carterae HM245439 Histone H2B XP_002782087 7e−17 71
Karlodinium veneficum HM245441 Histone H2B ACF75502 1e−21 68
P. lunula AY151192* Histone H3 AAA20819 1e−17 57
K. veneficum EC1592402* Histone H3 AY151192 2e−50 70
Symbiodinium sp. FE864064* Histone H3 AY151192 9e−08 56
Uncultured (e-cDNA) GU554466 Histone H4 XP_001175663 9e−32 91
A. carterae HM245435 Histone deacetylase XP_002504096 7e−62 61
K. veneficum HM245436 Histone deacetylase NP_578547 2e−30 52
Uncultured (e-cDNA) GU554524 dpy-30 like XP_002499412 7e−13 74
Uncultured (e-cDNA) GU554907 NAP1 XP_002764795 1e−27 58

*Existing DinoEST.