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. 2010 Dec;38(12):2195–2203. doi: 10.1124/dmd.110.034645

TABLE 3.

PLSR predictions of change in potency towards six P450 isoforms as a function of 16 chemical features, calculated for the compounds in S64

Feature 2C8 3A4 2D6 2C9 1A2 2C19
<25 Heavy atoms 0.03 a 0.13 0.03 0.00 0.06 0.07
25–45 Heavy atoms 0.10 0.09 0.06 0.06 0.04 0.01
>45 Heavy atoms 0.14 0.07 0.16 0.10 0.03 0.14
Positive charge 0.14 0.14 0.04 0.12 0.05 0.05
Negative charge 0.12 0.03 0.25 0.18 0.29 0.21
1 Ring 0.02 0.04 0.17 0.02 0.05 0.13
2 Fused rings 0.16 0.02 0.16 0.00 0.03 0.14
3 Fused rings 0.00 0.11 0.30 0.11 0.36 0.25
4 + Fused rings 0.11 0.07 0.10 0.11 0.27 0.09
Ester 0.02 0.06 0.25 0.10 0.26 0.10
Ether 0.16 0.09 0.03 0.15 0.13 0.05
Acid 0.21 0.02 0.04 0.12 0.02 0.01
Secondary amine 0.08 0.18 0.06 0.08 0.02 0.04
Tertiary amine 0.02 0.13 0.15 0.08 0.46 0.06
Nitroaromatic 0.23 0.18 0.24 0.21 0.48 0.27
Azole 0.25 0.43 0.00 0.31 0.06 0.31
a

Italics indicate values <0, i.e., presence of a feature correlates with lower potency (higher IC50) towards a particular isoform. A value of 0.5 corresponds to a 100.5 = 3.2-fold decrease in IC50.