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. Author manuscript; available in PMC: 2011 Jun 1.
Published in final edited form as: J Neurovirol. 2010 Jun;16(3):230–241. doi: 10.3109/13550281003735709

Figure 1. V3 loop consensus sequences.

Figure 1

The 35 consensus amino acids that span the V3 loop domain along with the overall charge of the domain are shown for each patient. Conserved positions, those that occur at a level of 95% or more, are shown in black and variable positions are shown in red. Lower case letters indicate a position that is conserved at a level of 51–94%, whereas a question mark indicates a position where no majority is observed.