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. 2010 Nov 30;5(11):e15094. doi: 10.1371/journal.pone.0015094

Table 3. The smallest recurrent aUPD regions in TN tumor samples.

Chromosomal Band Start-End Positions Length (bp) Possible Candidate Genes Possible Candidate miRNA
3p26.2-p26.1 3,500,000–4,500,000 1,000,001 SUMF1
3p26.1 5,750,000–7,500,000 1,750,001 GRM7
3p22.2# 37,479,869–38,325,230 845,362 ITGA9, DLEC1 miR-26a-1
3p22.1 42,071,245–43,557,137 1,485,893 TRAK1, CCK, LYZL4, VIPR1, SEC22C, SS18L2, NKTR, ZBTB47, KBTBD5, HHATL, CCDC13, HIGD1A, CCBP2, CYP8B1, ZNF662, C3ORF39, SNRK, ANO10
3p21.31 49,926,113–51,159,065 1,232,953 TUSC4, SEMA3F, SEMA3B, RASSF1, MAPKAPK3, HYAL1, HYAL2, FUS1 miR-566
3p14.2* 59,585,338–60,009,495 424,158 FHIT
9p23-p22.3* 13,531,695–14,417,560 885,866 NFIB
9p21.3* 21,948,524–23,513,491 1,564,968 MTAP, CDKN2A, CDKN2B, DMRTA1
9p21.3-p21.2* 21,014,103–25,983,972 4,969,870 CDKN2A, CDKN2B, TUSC1 miR-31
10q26.12-q26.13# 122,580,540–123,648,119 1,067,580 FGFR2, K-sam
11q22.3 103,938,480–105,262,960 1,324,481 CASP1, CASP4, CASP5,CASP12, CARD16, COP1, GRIA4
17q21.31-q21.32# 41,546,868–42,234,514 687,647 WNT3
17q22# 53,292,386–53,489,452 197,067 VEZF1, SFRS1

*Homozygous deletion,

#

Amplification.