Table 1.
Oligonucleotides used in this study
Primer | Sequence | Template |
---|---|---|
dproFw | CGTGCAGAAGATCTTGCGGATTCAGC | Drosophila melanogaster chromosome 2L; GeneID: 34528,34529 |
dproRev | GGATCCGCAGAATTCTGGTCTGAAAATAACGCGG | Drosophila melanogaster chromosome 2L; GeneID: 34528,34529 |
pBS-Fw | ATAGGGCGAATTGGGTACCG | pBlueScript SK+ |
pBS-Rev | AAAGGGAACAAAAGCTGGAGC | pBlueScript SK+ |
PUbsd-Fw | TCGGGATGACTTTTGGGTTCTG | Drosophila melanogaster chromosome 2L; GeneID: 34528,34529 |
PUbsd-R544 | AGTGACCAAACTACAGATCCACG | Drosophila melanogaster chromosome 2L; GeneID: 34528,34529 |
PUbsd-R1057 | CCGCTCTAGAACTAGTGGATC | pBlueScript SK+ |
MEFdut-1168Fw | GCAGGCACAGTGTGATGAAGG | Mus musculus, chromosome 2; GeneID: 110074 |
MEFdut-1168Rev | GTGGCTTTAACCCACTGGTGAC | Mus musculus, chromosome 2; GeneID: 110074 |
gdh656_Fw | GACGGTCATCTGATCGTTAACG | Escherichia coli; GeneID: 947679 |
gdh656_Rev | ACTACGTCATCTTCGGTGTAGC | Escherichia coli; GeneID: 947679 |
Primers used in the PCR reaction to generate plasmid pBS-dutP: dproFw and dproRev primers. Primers used for the amplification of artificial templates by Taq polymerase in the presence different concentration of dUTP: pBS-Fw, pBS-Rev. Primers used for quantification of uracil in artificial and plasmid DNA samples: PUbsd-Fw, PUbsd-R544 (544-bp amplicon length), PUbsd-R1057 (1057-bp amplicon length). Primers used for quantification of uracil in the genome of mouse embryonic fibroblast cells: MEFdut-1168Fw, MEFdut-1168Rev (1168-bp amplicon length). Primers used for quantification of uracil in E. coli genome: gdh656_Fw, gdh656_Rev (656-bp amplicon length).