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. Author manuscript; available in PMC: 2010 Dec 1.
Published in final edited form as: J Phys Chem B. 2007 Feb 1;111(4):720–730. doi: 10.1021/jp066478s

TABLE 2.

Energetics for the First Step of the Decomposition of Urea Assisted by One Water Molecule Leading to the H3NCONH Zwitterion (Int2)

PDDG PDDG GB/SA QM/MM MC/FEP B3LYP/6-311++G** MP2/6-311++G** ICPMd
ΔE (ZPE-corrected), kcal/mol 53.3b 27.3 24.6
ΔE0= ΔE + ΔEthermala 23.2
ΔH = ΔE + ΔnRT, kcal/mol 23.2
ΔG = ΔH − TΔ S, kcal/mol 26.6 24.9
ΔGsolution = ΔG + ΔΔGsolvation 34.2b,c 21.1 26.4c 23.1
a

Ethermal = Evibtational + Erotational + Etranslational.

b

Vibrational frequencies were not calculated at the PDDG level.

c

The values include the ΔG of hydration obtained from the GB/SA model.

d

Results from Ref. 17.