Table 3.
The clinical condition ‘vomiting’, which maps to both sensitive and specific gastrointestinal syndrome
Clinical condition: vomiting | ||
Concept (relation to condition) | Keywords, regular expressions representing keywords and UMLS CUI | |
Vomiting (Condition name) | vmt, n/v, v/n, v/d, d/v, v+d, d+v, n+v, v+n, v + d, d + v, d & v, dry heaves, emsis, f v, fv, n v, n & v, n v, n v d, n&v, n+v, nv, nvd, retching, v d, v f, v&d, v+d, vimiting, viomiting, vmt, vo, voimiting, voiting, vom, vometing, vomi, vomikting, vomintg, vominting, vomit, vomited, vomiti, vomitibg, vomitin, vomitine, vomiting, vomitinig, vomitiong, vomitng, vomitt, vomitting, vomittng, vomitus, vommiting, vomoting, vomtiing, vomtiming, vomting, vomtiting, puke, n v, retching, v d, vomit, vomicking, cant hold any food down, threw up, throw up, throwing up, emesis, emisis | |
Regular expressions (3 of 73 shown below) and UMLS CUI: | ||
\bd\s&\sv\b | C0042963 Vomiting | |
\bdry heaves\b | C0232602 Retching | |
\bvomitus\b | C0042965 Vomitus | |
Spitting up (Synonym) | Keywords: | |
bringing up, spitting up | ||
Regular expressions and UMLS CUI: | ||
\bbringing\sup\b | C0042963 Spitting up | |
\bspitting\sup\b | C0042963 Spitting up | |
Hematemesis (Related concept) | Keywords: | |
hematemesis, coffee ground emesis, throw* up blood, vomit* blood | ||
Regular expressions and UMLS CUI: | ||
\bhematemesis\b | C00189261 Hematemesis | |
\bcoffee\sground\semesis\b | C1510416 Coffee ground vomiting | |
\b(throw\w*?\s+up|vomit)\s*\+\s*blood\b | C00189261 Hematemesis |
A single clinical condition is composed of concepts that map to the condition as either the condition name, a synonym of the condition or a related condition. Each concept is associated with keywords used by implemented surveillance systems. We also created regular expressions for the keywords and mapped each regular expression to a UMLS concept unique identifier. Some regular expressions map to the same concept unique identifier (CUI).