Table 2.
List of the species studied and the DDBJ/EMBL/GenBank accession numbers of their mitochondrial genome sequences
| Scientific name | Common name | Accession No. |
|---|---|---|
| Evolutionarily stable gene orders | ||
| Agnatha | ||
| Eptatretus burgeri | Inshore hagfish | AJ278504 |
| Myxine glutinosa | Atlantic hagfish | AJ404477 |
| Petromyzon marinus | Sea lamprey | U11880 |
| Chondrichthyes | ||
| Chimaera monstrosa | Rabbitfish | AJ310140 |
| Scyliorhinus canicula | Catshark | Y16067 |
| Squalus acanthias | Spiny dogfish | Y18134 |
| Heterodontus francisci | Horn shark | AJ310141 |
| Raja radiata | Thorny skate | AF106038 |
| Actinopterygii | ||
| Lepisosteus spatula | Alligator gar | AP004355 |
| Cyprinus carpio | Common carp | AP009047 |
| Gadus morhua | Atlantic cod | X99772 |
| Pagrus major | Seabream | AP002949 |
| Paralichthys olivaceus | Bastard halibut | AB028664 |
| Amphibia | ||
| Ambystoma mexicanum | Axolotl | AJ584639 |
| Andrias japonicus | Giant salamander | AB208679 |
| Bombina bombina | Fire-bellied toad | AY458591 |
| Xenopus laevis | Clawed frog | M10217 |
| Ichthyophis glutinosus | Caecilian | AY456251 |
| Reptilia | ||
| Chelonia mydas | Seaturtle | AB012104 |
| Geochelone pardalis | Tortoise | DQ080041 |
| Gekko gecko | Tokay | AY282753 |
| Iguana iguana | Iguana | AJ278511 |
| Geocalamus acutus | Worm lizard | AY605476 |
| Aves | ||
| Gallus gallus | Chicken | X52392 |
| Nipponia nippon | Crested ibis | AB104902 |
| Vidua chalybeata | Widowfinch | AF090341 |
| Falco peregrinus | Peregrine falcon | AF090338 |
| Buteo buteo | Buzzard | AF380305 |
| Mammalia | ||
| Homo sapiens | Human | AF347015 |
| Mus musculus | Mouse | AY172335 |
| Bos taurus | Cattle | AY526085 |
| Canis lupus | Gray wolf | DQ480505 |
| Balaenoptera musculus | Blue whale | X72204 |
| Rearranged gene orders within lower taxa | ||
| Actinopterygii | ||
| Eurypharynx pelecanoides | Pelican eel | AB046473 |
| Saccopharynx lavenbergi | Gulper eel | AB047825 |
| Gonostoma gracile | Slender fangjaw | AB016274 |
| Myctophum affine | Lantern fish | AP002922 |
| Caelorinchus kishinouyei | Grenadier | AP002929 |
| Aspasma minima | Clingfish | AP004453 |
| Aulostomus chinensis | Trumpet fish | AP009197 |
| Chlorurus sordidus | Parrot fish | AP006567 |
| Amphibia | ||
| Rana nigromaculata | Pond frog | AB043889 |
| Buergeria buergeri | Kajika frog | AB127977 |
| Rhacophorus schlegelii | Tree frog | AB202078 |
| Reptilia | ||
| Boa constrictor | Boa | AB177354 |
| Dinodon semicarinatus | Colubrid snake | AB008539 |
| Gloydius blomhoffii | Pit viper | EU913477 |