Table 1.
Method | Total Reads | Reads Used | Theoretical Coverage* | # Contigs (>100 bp)^ | Total size (Mb)§ |
---|---|---|---|---|---|
Sanger | 178 | 178 | n/a | n/a | n/a |
GAI 32 single | 16,852,820 | 9,298,356 | 83 | 5,884 | 6.06 |
GAII 70 PE | 10,854,745 | 9,013,849 | 234 | 95 | 6.27 |
454 | 202,070 | 200,467 | 7 | 2,204 | 6.10 |
All short reads | 38,764,380 | 23,742,926 | 316 | 256 | 6.26 |
All reads | 38,764,558 | 23,810,966 | 316 | 115 | 6.27 |
*Based on approximated genome size of 6.5 Mb; ^Highest confident draft assemblies using Velvet 0.7.55 [22]; ^Improved, high quality draft including Sanger reads. n/a = not applicable; §Based on sum total of all contigs > 100 bp in length.