Table 1.

Number of Predicted Genes, Duplicates, and LSDs for Saccharomyces cerevisiae

Strain	Contigs	Predicted Genes	Duplicate Genes	LSDs
				Inc. Trans.a	No Trans.b
DBVPG6765	2,879	5,770	1,195	84	81
RM11_1A	384	5,501	1,353	86	77
REF (S288c)	18	5,464	1,356	149	100
SK1	2,827	5,797	1,219	83	72
W303	3,853	5,296	837	34	20
Y55	2,751	5,875	1,282	94	92
YJM789	207	5,437	1,292	29	15
DBVPG1373	3,656	3,974	378	6	4
DBVPG1788	3,617	3,621	340	2	2
DBVPG6044	3,955	4,276	457	2	2
L_1374	3,150	3,118	256	6	6
L_1528	3,439	3,380	302	12	10
S288c	3,408	3,516	367	9	3
UWOPS05_227_2	3,021	3,177	235	0	0
YIIc17_E5	2,955	3,010	235	6	2
YJM975	3,061	3,174	235	2	2
YJM978	2,975	3,084	250	4	4
YPS128	3,696	4,097	415	11	6
YPS606	4,033	4,615	563	9	4
YS4	3,021	3,119	280	26	24
YS9	3,029	3,090	287	46	40
273614N	2,591	2,485	159	2	2
322134S	2,727	2,548	196	13	8
378604X	3,014	2,998	255	14	10
BC187	2,309	2,044	92	2	2
DBVPG1106	2,013	1,802	86	4	2
DBVPG1853	3,026	2,879	198	2	0
DBVPG6040	2,487	2,384	210	16	14
K11	2,657	2,629	163	2	2
NCYC110	2,395	2,277	145	0	0
NCYC361	1,873	1,301	83	16	14
UWOPS03_461_4	2,927	2,969	223	4	4
UWOPS05_217_3	2,454	2,591	241	8	8
UWOPS83_787_3	2,713	2,721	206	19	16
UWOPS87_2421	2,796	2,816	221	6	6
Y12	2,584	2,472	147	6	6
Y9	2,324	2,274	130	0	0
YJM981	1,435	1,238	62	2	2
YS2	2,294	1,639	112	8	6

^aNumber of LSDs including transposable genes.

^bNumber of LSDs excluding transposable genes.