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. Author manuscript; available in PMC: 2012 Jan 1.
Published in final edited form as: Biochim Biophys Acta. 2010 Oct 21;1808(1):498–507. doi: 10.1016/j.bbamem.2010.10.011

Table 2.

Structural statistics for the 100 accepted (<SA>) and the energy minimized average (<SA>r) NMR structures of [113-122]apoJ associated with DPC micelle

Experimental restraints
Intraresidue NOEs 41
Sequential NOEs 23
Medium and long range NOEs 19
(i,i+2; i,i+3; and i,i+4)
Other NOEs 8
Hydrogen bonds (H-O distance) 7
Φ angles 9
Ψ angles 8
Total 115
Mean r.m.s.d.a from experimental restraints <SA> ± SDb
Distance restraints (Å) 0.022±0.004
Dihedral angle (°) 0.054±0.123
Mean r.m.s.d. from ideal geometry <SA> ± SD
Bonds (Å) 0.001±0.000(4)
Angles (°) 0.473±0.029
Impropers (°) 0.374±0.038
Ramachandran statistics from PROCHECK-NMRc
Residues in most favored α helical region 100 %
r.m.s.d. from the average structure (Å)
Backbone N, Cα, C 0.296
All heavy atoms 1.371
Pairwise r.m.s.d. analysis
Average backbone pairwise r.m.s.d. (Å) 0.420 (±0.122)
Average non-hydrogen atom pairwise r.m.s.d. (Å) 1.875 (±0.264)
X-PLOR potential energies (kcal/mol)
<SA> ± SD (<SA>r)d
Eoverall 15.039±2.489 14.774
Ebond 0.378±0.147 0.408
Eangle 11.095±1.446 10.971
Eimpropers 1.969±0.424 1.809
Evdw 0.328±0.532 0.0
ENOE 1.248±0.522 1.585
Ecdih 0.018±0.072 0.0
a

Root mean square deviation.

b

Standard deviation.

c

Ref. [41]

d

200 cycles of conjugate gradient minimization were used. All of the NMR constraints were enforced during the energy minimization of the average coordinates.