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. Author manuscript; available in PMC: 2012 Jan 1.
Published in final edited form as: J Proteomics. 2010 Aug 6;74(1):44–58. doi: 10.1016/j.jprot.2010.07.010

Table 2.

Acinetobacter baumannii ATCC 19606T Fe-induced proteins.

Spota ASQb
 Protein function/namec
Source is italicized 		Genec NCBI Accession # Theoreticald
 Se Mf Cg Fh
A B C D Mr pI
Porins
32 graphic file with name nihms235258t20.jpg Putative outer membrane protein W
A. baumannii ATCC 19606T 		ompW gi|260556338 23137 6.29 93 8 57 OM
43 graphic file with name nihms235258t21.jpg Putative outer membrane protein W
A. baumannii ATCC 19606T 		ompW gi|260556338 23137 6.29 83 8 57 OM
44 graphic file with name nihms235258t22.jpg Outer membrane protein A
A. baumannii 		ompA gi|129307154 36939 5.42 109 12 37 OM
56 graphic file with name nihms235258t23.jpg Outer membrane protein Omp38
A. baumannii ATCC 19606		 omp38 gi|260557183 38397 5.32 86 7 20 OM
58 graphic file with name nihms235258t24.jpg Outer membrane protein Omp38
Acinetobacter sp. RUH2624		 omp38 gi|260548855 37972 5.72 139 15 39 OM
Adaptation/Stress tolerance
5 graphic file with name nihms235258t25.jpg Chaperonin GroEL
A. baumannii SDF		 groEL gi|169632653 56886 4.92 273 34 55 TC
8 graphic file with name nihms235258t26.jpg Superoxide dismutase (Fe)
A. baumannii SDF		 sodB gi|169632935 22905 5.56 123 6 41 TC
9 graphic file with name nihms235258t27.jpg Bacterioferritin
A. baumannii ATCC 17978		 bfr gi|126640856 18023 5.02 137 17 70 TC
10 graphic file with name nihms235258t28.jpg Superoxide dismutase (Fe)
A. baumannii SDF		 sodB gi|169632935 22905 5.56 109 8 44 TC
24 graphic file with name nihms235258t29.jpg Superoxide dismutase (Fe)
A. baumannii SDF		 sodB gi|169632935 22905 5.56 83 8 44 TC
38 graphic file with name nihms235258t30.jpg Bacterioferritin
A. baumannii ATCC 19606T 		bfr gi|260410611 18137 5.02 106 14 72 OM
41 graphic file with name nihms235258t31.jpg Bacterioferritin
A. baumannii ATCC 19606T 		bfr gi|260410611 18137 5.02 78 9 45 OM
42 graphic file with name nihms235258t32.jpg Bacterioferritin
A. baumannii ATCC 19606T 		bfr gi|260410611 18137 5.02 100 12 66 OM
TCA cycle
14 graphic file with name nihms235258t33.jpg Succinate dehydrogenase flavoprotein subunit
A. baumannii ATCC 17978		 sdh gi|126642744 64049 6.07 92 6 18 TC
15 graphic file with name nihms235258t34.jpg Aconitate hydratase 2
A. baumannii ATCC 19606T 		acnB gi|260411150 95322 5.07 238 37 48 TC
19 graphic file with name nihms235258t35.jpg Fumarate hydratase
A. baumannii ATCC 17978		 fumA gi|193076292 54948 5.44 129 18 49 TC
20 graphic file with name nihms235258t36.jpg Aconitate hydratase 2
A. baumannii ATCC 19606T 		acnB gi|260411150 95322 5.07 136 24 32 TC
21 graphic file with name nihms235258t37.jpg Aconitate hydratase 1
A. baumannii ATCC 19606T 		acnA gi|260556094 100503 5.28 410 36 44 TC
30 graphic file with name nihms235258t38.jpg Succinate dehydrogenase flavoprotein subunit
A. baumannii ATCC 17978		 sdh gi|126642744 64049 6.07 169 21 46 TC
Lipid Metabolism
3 graphic file with name nihms235258t39.jpg Beta-ketoadipyl CoA thiolase
A. baumannii ATCC 19606		 pcaF gi|260555473 43107 5.96 138 20 54 TC
18 graphic file with name nihms235258t40.jpg Acyl-CoA dehydrogenase
A. baumannii ATCC 19606T 		gi|260554863 42780 5.30 185 26 46 TC
25 graphic file with name nihms235258t41.jpg 2-ketocyclohexanecarboxyl-CoA hydrolase
A. baumannii ATCC 19606T 		gi|260555475 29342 5.75 231 27 76 TC
29 graphic file with name nihms235258t42.jpg 2-hydroxycyclohexanecarboxyl- CoA dehydrogenase
A. baumannii ATCC 19606T 		fabG gi|260555032 27802 5.96 100 10 50 TC
Regulatory
2 graphic file with name nihms235258t43.jpg Host factor I for bacteriophage Q beta replication hfq
A. baumannii AYE		 hfq gi|169795564 16751 6.82 91 8 39 TC
51 graphic file with name nihms235258t44.jpg 50S ribosomal protein L3
A. baumannii AYE		 rplC gi|169794594 22523 9.87 108 10 63 OM
Energy/Metabolisms
1 graphic file with name nihms235258t45.jpg Phenylacetate-CoA oxygenase subunit PaaB
A. baumannii ATCC 17978		 paaB gi|126641383 11317 6.04 176 15 86 TC
11 graphic file with name nihms235258t46.jpg Putative flavohemoprotein (hemoglobin-like protein)
A. baumannii ATCC 19606T 		gi|260409628 28814 4.91 188 15 60 TC
12 graphic file with name nihms235258t47.jpg Phenylacetate-CoA oxygenase/ reductase PaaK subunit
A. baumannii ATCC 17978		 paaK gi|193077015 39763 5.03 195 25 63 TC
16 graphic file with name nihms235258t48.jpg Benzoate 1,2-dioxygenase, small subunit
A. baumannii ATCC 19606T 		gi|260554867 18965 5.22 93 6 30 TC
28 graphic file with name nihms235258t49.jpg Phenylacetate-CoA oxygenase subunit PaaB
A. baumannii ATCC 17978		 paaB gi|126641383 11317 6.04 196 16 91 TC
Unknown
6 graphic file with name nihms235258t50.jpg Putative 17-kDa Surface antigen
A. baumannii ACICU		 gi|184157742 12424 4.70 87 8 83 TC
7 graphic file with name nihms235258t51.jpg Signal peptide ydeN
A. baumannii ATCC 19606T 		ydeN gi|260556330 22987 4.75 92 7 34 TC
13 graphic file with name nihms235258t52.jpg Hypothetical protein A1S_1295
A. baumannii ATCC 17978		 gi|193076983 55265 5.07 129 17 39 TC
23 graphic file with name nihms235258t53.jpg Hemerythrin HHE cation binding domain protein
A. baumannii AB900		 gi|239501928 17516 5.68 88 9 53 TC
40 graphic file with name nihms235258t54.jpg Hypothetical protein A1S_1295
A. baumannii ATCC 17978		 gi|193076983 55265 5.07 149 20 49 OM
a

The spot numbers correspond to the numbers given in Figures 2, 3 and 4.

b

Average spot quantity per treatment group (n = 3); columns A, −Fe/−DIP; B, +Fe/−DIP; C, −Fe/+DIP; D, +Fe/+DIP.

c

Protein function, name and gene were determined by http:/www.ncbi.nlm.nih.gov/BLAST/.

d

Theoretical molecular mass (Mr) and isoelectric point (pI) were calculated by http:/www.expasy.org/.

e

Mascot score.

f

Number of matched peptide masses.

g

Percent sequence coverage.

h

Protein fraction, total cell (TC) or Outer membrane-enriched (OM) protein extracts.