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. 2010 Nov 18;10:357. doi: 10.1186/1471-2148-10-357

Table 1.

List of attributes used for the predictions

# Attribute Type Description
1 CLUSTALW Score Sequence ClustalW alignment score

2 E-value Sequence BLAST alignment E-value

3 Isoe Pt Diff Sequence percent difference in isoelectric points

4 Mol W Diff Sequence percent difference in molecular weight

5 Nonsyn Subst Rate Sequence non-synonymous substitution rate

6 Protien Domain Sharing Index Sequence intersection/union of predicted protein domain

7 Score Sequence BLAST alignment bit score

8 All Experiments Expression 2799 ATH1 microarray experiments

9 Atlas of Arabidopsis Development Expression 264 ATH1 microarray experiments

10 Atmosphereric Conditions Expression 172 ATH1 microarray experiments

11 Change Light Expression 127 ATH1 microarray experiments

12 Change Temperature Expression 112 ATH1 microarray experiments

13 Compound Based Treatment Expression 248 ATH1 microarray experiments

14 Genetic Modification Expression 952 ATH1 microarray experiments

15 Genetic Variation Expression 22 ATH1 microarray experiments

16 Growth Condition Treatments Expression 74 ATH1 microarray experiments

17 Growth Conditions Expression 503 ATH1 microarray experiments

18 Hormone Treatments Expression 256 ATH1 microarray experiments

19 Induced Mutation Expression 18 ATH1 microarray experiments

20 Infect Expression 61 ATH1 microarray experiments

21 Injury Design Expression 28 ATH1 microarray experiments

22 Irradiate Expression 28 ATH1 microarray experiments

23 Light Expression 12 ATH1 microarray experiments

24 Media Expression 54 ATH1 microarray experiments

25 Organism Part Expression 806 ATH1 microarray experiments

26 Organism Status Expression 16 ATH1 microarray experiments

27 Pathogen Infection Expression 200 ATH1 microarray experiments

28 Root Cells Expression 59 ATH1 microarray experiments

29 Root Cells Iron Salt Treatments Expression 17 ATH1 microarray experiments

30 Root Cells Nitrate Treatments Expression 20 ATH1 microarray experiments

31 Root Developmental Zones Expression 11 ATH1 microarray experiments

32 Root Developmental Zones (Fine Scale) Expression 24 ATH1 microarray experiments

33 Root Regeneration Expression 11 ATH1 microarray experiments

34 Seed Development Expression 6 ATH1 microarray experiments

35 Set Temperature Expression 4 ATH1 microarray experiments

36 Starvation Expression 22 ATH1 microarray experiments

37 Stimulus or Stress Expression 320 ATH1 microarray experiments

38 Strain or Line Expression 32 ATH1 microarray experiments

39 Temperature Expression 15 ATH1 microarray experiments

40 Time Series Design Expression 427 ATH1 microarray experiments

41 Unknown Experimental Design Expression 8 ATH1 microarray experiments

42 Wait Expression 17 ATH1 microarray experiments

43 Water Availability Expression 40 ATH1 microarray experiments