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. Author manuscript; available in PMC: 2011 Dec 1.
Published in final edited form as: Mol Ecol. 2010 Nov 3;19(24):5332–5344. doi: 10.1111/j.1365-294X.2010.04888.x

Table 1.

Sample-level heterozygosity.

Individual Source Chromosome 21 Chromosome X
Sites (bp)1 Hets.2 π, %3 Sites (bp)1 Hets.2 π, %3
93A009 Flint (male) Blood 953,738 837 0.088 446,949 5 0.001
Fecal 926,914 779 0.084 437,025 5 0.001
A2A009 Sopulu (male) Blood 970,322 968 0.100 461,782 6 0.001
Fecal 932,429 916 0.098 440,746 2 0.001
X161 Judd (male) Blood 969,471 800 0.083 460,384 2 0.000
Fecal 951,672 778 0.082 460,706 4 0.001
91A016 Coty (male) Blood 969,566 848 0.087 462,098 5 0.001
Fecal 941,109 791 0.084 457,146 1 0.000
91A010 Peanut (female) Blood 964,745 764 0.079 467,563 178 0.038
Fecal 904,775 712 0.079 462,743 173 0.037
A1A005 Kierra (female) Blood 967,457 979 0.101 468,931 172 0.037
Fecal 904,089 886 0.098 447,698 147 0.033
1

Number of sites with filtered read coverage sufficient for SNP identification.

2

Number of heterozygous sites in each sample identified using the criteria described in Materials and Methods (the X chromosome heterozygous sites in males are false positives).

3

Pairwise nucleotide diversity, the percentage of heterozygous sites (π for the X chromosome in males is an approximation of the false-positive error rate).