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. 2010 Oct 22;2:241–246. doi: 10.2147/CLEP.S13811

Table 1.

Summary data for the SNPs analyzed for tumor/normal tissue genotype concordance

Gene/variant Reference SNP Location Sequence [SNP] Expected allele frequencies
Cytochrome P450 2D6/CYP2D6*4 rs3892097 22q13.1 CCCCTTACCCGCATCTCCCACCCCCA [A/G]
GACGCCCCTTTCGCCCCAACGGTCT
A: 0.763
G: 0.237a
UDP-glucuronosyltransferase 2B15/UGT2B15*2 rs1902023 4q13 TTTATCCTACATCTTTAACTAAAAAT [G/T]
ATTTGGAAGATTCTCTTCTGAAAAT
G: 0.560
T: 0.440b
UDP-glucuronosyltransferase 1A8/UGT1A8*2 rs1042597 2q37 CTCTGTGGTCTTCGCCAGGAATAG [C/G]
TTGCCACTATCTTGAAGAAGGTGCA
C: 0.714
G: 0.286a
a

Notes: Allele frequencies reported for Caucasians on NCBI dbSNP database: http://www.ncbi.nlm.nih.gov/snp;

b

Allele frequencies reported for Europeans on ALFRED database: http://alfred.med.yale.edu21.

Abbreviation: SNP, single nucleotide polymorphism.