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. 2009 Oct 1;4(1):21–42. doi: 10.1186/1479-7364-4-1-21

Table 4.

Results of Markov chain Monte Carlo fitting of single-compartment models with homocysteine as an unobserved intermediate metabolite, created at a rate depending on SAHH (λ) and removed at a rate depending on CBS (μ), applied to the simulation taking homocysteine concentration as the causal variable

Model Ln(β) λ μ
Mean SD Mean SD
Linear:
λ, μ fixed 1.63 (0.13) 0.152 (0.030) 0 0.226 (0.031) 0
λ, μ random 1.55 (0.13) 0.178 (0.029) 0.079 (0.024) 0.256 (0.037) 0.082 (0.021)
Michaelis-Menten:
λ, μ fixed: ln(μ00)
ln[Vmax(1)/Vmax(0)]
ln(Kmμ/Kmλ)
2.77 (0.13) 0
0.058 (0.010)
0
0
0
0
0.765 (0.037)
0.086 (0.010)
-0.743 (0.042)
0
0
0
γs random: ln(μ00) ln[Vmax(1)/Vmax(0)] lnmμ/Kmλ 2.99 (0.06) 0
0.061 (0.011)
0
0
0.023 (0.005)
0
1.022 (0.002)
0.091 (0.001)
-1.008 (0.001)
0.007 (0.001)
0.003 (0.001)
0.005 (0.001)
Stochastic differential equations:
N = 10 fixed 1.22 (0.07) 0.209 (0.016) 0 0.273 (0.014) 0
N~Γ100,1:N^=116 3.16 (0.06) 0.161 (0.011) 0 0.215 0.010) 0

CBS, cystathionine b-synthase; SAHH, S-adenosylhomocysteine.