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. 2010 Dec 8;5(12):e15199. doi: 10.1371/journal.pone.0015199

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Martin et al.

This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.

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α1, genes encoding transcription factors with an α1 domain; PPF, genes encoding proteins with a domain characterized by highly conserved proline and phenylalanine residues [41]; HMG, genes encoding transcription factors with an HMG domain; HD, genes encoding transcription factors with an homeodomain; OTHER, genes encoding proteins not relevant to this study. The standardized nomenclature [7] currently used for Pezizomycotina is indicated below the corresponding domains. +, gene present; +/−, gene present in some species from a group. Mating-type structures were compiled for the following species and corresponding references: Saccharomyces cerevisiae, Kluyveromyces lactis, Candida albicans and Yarrowia lipolytica [49], [65], Schizosaccharomyces pombe [8], Ustilago maydis [66], Phycomyces blakesleeanus [17] and Encephalitozoon cuniculi [46]. The Pc gene from S. pombe was placed in the HMG class in agreement with the current classification of Pc protein (P10841) in Swissprot. Mating-type genes from U. maydis, P. blakesleeanus and E. cuniculi were placed arbitrarily in mating type 1 or 2.