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. Author manuscript; available in PMC: 2010 Dec 9.

Published in final edited form as: J Med Virol. 2008 Jul;80(7):1142–1152. doi: 10.1002/jmv.21204

Fig. 1 — Phylogenetic trees based on sequences (A) from the 5′NCR-C region and (B) from the NS5B region. The 5′NCR and NS5B sequences correspond to nucleotides 41–681 and 8,343–9,226 in the numbering of H77 genome (NC_004102), respectively. HCV genotypes are indicated with 1–6 and subtypes are indicated with 1a–6u. Bootstrap values (%) are shown under trunks close to the related clusters. Reference sequences are displayed in bold with Genbank accession numbers. The sequences determined in this study are shaded and indicated with vertical lines and HCV subtypes on the right. Sequences from two IDUs (HH075 and DH102) are indicated by stars. They were suspected to have mixed HCV infection or virus recombination. The bar at the base of each figure shows the scale for nucleotide substitution per site.

Fig. 1 — Phylogenetic trees based on sequences (A) from the 5′NCR-C region and (B) from the NS5B region. The 5′NCR and NS5B sequences correspond to nucleotides 41–681 and 8,343–9,226 in the numbering of H77 genome (NC_004102), respectively. HCV genotypes are indicated with 1–6 and subtypes are indicated with 1a–6u. Bootstrap values (%) are shown under trunks close to the related clusters. Reference sequences are displayed in bold with Genbank accession numbers. The sequences determined in this study are shaded and indicated with vertical lines and HCV subtypes on the right. Sequences from two IDUs (HH075 and DH102) are indicated by stars. They were suspected to have mixed HCV infection or virus recombination. The bar at the base of each figure shows the scale for nucleotide substitution per site.