Table 2. Comparison of the number of genes, the length of individual genes, and the length of the entire gene complex in the sex loci of P. blakesleeanus, M. circinelloides and R. oryzae complex.
Parts of mating type locus | P. blakesleeanus | M. circinelloides | R. oryzae | |||
(+) | (−) | (+) | (−) | (+) | (−) | |
GenBank accession # | EU009462 | EU009461 | FJ009107 | FJ009106 | HQ450315 | HQ450316 |
Total fragment length3 | 9.97 | 7.63 | 6.88 | 6.86 | 13.31 | 6.96 |
Intergenic regions, total length3 | 5.33 | 3.53 | 0.57 | 0.88 | 3.21 | 1.5 |
TPT (EamA-like transporter family)4 | 2891 | 2761 | 440 | |||
BTB domain & ankyrin repeat (RO3G_01289)4 | - | - | 3952 | |||
BTB/POZ domain (RO3G_01289)4 | - | - | 5902 | |||
Predicted protein, Rcc1 (RO3G_01290) 4 | - | - | 1522 | |||
HMG (MATA box)4 | 2581 | 211 | 326 | 249 | 314 | 188 |
RNA helicase (RO3G_01291) 4 | 649 | 1231 | 1187 | |||
Repetitive elements | 1 | - | - | - | 3 | 2 |
Inverted repeats | - | - | - | - | 1 | - |
Palindromes | - | - | - | - | 3 | 1 |
Inverted genes.
Single ORF.
Length of DNA shown in kilobases.
Length of protein shown in amino acids.