Table 2. Non-synonymous variants found in 1,473 individuals of the SAPHIR study.
# | Variation | n (Aa/aa) | MAF [%] | dbSNP Accession | |
Rare variants | |||||
1 | p.R79Q | c.236G>A | 3/0 | 0.10 | ss262967480 |
2 | p.R113H | c.338G>A | 1/0 | 0.03 | ss262967482 |
3 | p.H131R | c.392A>G | 1/0 | 0.03 | ss262967486 |
4 | p.L219F | c.655C>T | 1/0 | 0.03 | ss262967495 |
5 | p.D244fs a | c.732delT | 1/0 | 0.03 | ss262967539 |
6 | p.N252K | c.756C>G | 26/0 | 0.88 | ss262967509 |
7 | p.P260A | c.778C>G | 1/0 | 0.03 | ss262967513 |
8 | p.V402I | c.1204G>A | 1/0 | 0.03 | ss262967521 |
9 | p.N426S | c.1277A>G | 1/0 | 0.03 | ss262967523 |
10 | p.E437K | c.1309G>A | 1/0 | 0.03 | ss262967525 |
11 | p.P477R | c.1430C>G | 2/0 | 0.07 | ss262967527 |
Polymorphisms | |||||
12 | p.P265S | c.793C>T | 79/0 | 2.28 b | rs56152088 |
13 | p.P481Lc | c.1442C>T | 702/136 | 28.78 b | rs1138693 |
a Results in a premature stop at amino acid 254.
b SNP was genotyped in the complete SAPHIR population (nā=ā1726).
c This SNP is defined in dbSNP as leucine to proline substitution, however, the proline allele is significantly more common. Therefore the SNP is given here as proline to leucine substitution.