Table 2.
Edman's degradation | LTXVTKDTIFGITTQNXPAGQNLXFIRRHYINHRYTEITRGXTATXPKPTNVRE------------ | ||
---|---|---|---|
Mass sequencing | -----------------–-----------------------------------ETIHCCNTDKCNE | ||
Loops | -------1----- ---------2------- -----3----- | % | |
ρ-Da1b | Da | LTCVTKDTIFGITTQNCPAGQNLCFIRRHYINHRYTEITRGCTATCPKPTNVRETIHCCNTDKCNE | |
MT-α | Dpp | LTCVTSKSIFGITTENCPDGQNLCFKKWYYLNHRYSDITWGCAATCPKPTNVRETIHCCETDKCNE | 77 |
MT3 | Da | LTCVTKNTIFGITTENCPAGQNLCFKRWHYVIPRYTEITRGCAATCPIPENY-DSIHCCKTDKCNE | 76 |
MT4 | Da | LTCVTSKSIFGITTENCPDGQNLCFKKWYYIVPRYSDITWGCAATCPKPTNVRETIHCCETDKCNE | 76 |
MT1 | Da | LTCVTSKSIFGITTENCPDGQNLCFKKWYYIVPRYSDITWGCAATCPKPTNVRETIRCCETDKCNE | 74 |
MT-β | Dpp | LTCVTSKSIFGITTEDCPDGQNLCFKRRHYVVPKIYDITRGCVATCPIPENY-DSIHCCKTDKCNE | 67 |
ρ-Da1a | Da | LTCVTSKSIFGITTEDCPDGQNLCFKRRHYVVPKIYDSTRGCAATCPIPENY-DSIHCCKTDKCNE | 66 |
Cm3 | Dpp | LTCVTSKSIFGITTEDCPDGQNLCFKRRHYVVPKIYDITRGCVATCPIPENY-DSIHCCKTEKCNN | 64 |
MT2 | Da | LTCVTTKSIGGVTTEDCPAGQNVCFKRWHYVTPKNYDIIKGCAATCPKVDNN-DPIRCCGTDKCND | 55 |
MT7 | Da | LTCVKSNSIWFPTSEDCPPGQNLCFKRWQYISPRMYDFTRGCAATCPKAEYR-DVINCCGTDKCNK | 54 |
β-ca | Oh | RKCLNTPLPLIYTT--CPIGQDKCVKMTIKKLPSKYDVIRGCIDICPKSSA-DVEVLCCDTNKCNK | 36 |
Percentage identity, relative to ρ-Da1b, is indicated for each sequence. Residues that differ from ρ-Da1b are in bold. Da, Dendroaspis angusticeps; Dpp, Dendroaspis polylepis polylepis; Nak, Naja kaouthia; β-Ca, β-cardiotoxin; Oh, Ophiophagus hannah.