Table 4. Analyses of the sequence data produced by Cohen et al. [11].
Test | |||||
Sample | Collapsing | SCollapsing | AOC | GWWS | SGWWS |
Sample 1 | 3.16E-3 | 1.29E-3 | 1.60E-3 | 1.96E-3 | 4.31E-4 |
Sample 2 | 0.03 | 0.01 | 0.02 | 0.02 | 0.02 |
Combined | 1.23E-4 | 3.68E-5 | 3.90E-5 | 1.00E-4 | 5.86E-6 |
Notes: The candidate gene NPC1L1 was sequenced in two samples. The first sample (Sample 1) was comprised of 128 individuals with highest ratios of campesterol to lathosterol (Ca∶L ratio) and 128 individuals with lowest ratios from the Dallas Heart Study (DHS). A total number of 16 non-synonymous variants were analyzed, 13 of which are exclusive in cases and 3 exclusive in controls. The second sample (Sample 2) was comprised of the same number of individuals with the next highest and lowest Ca∶L ratios from the DHS. A total number of 12 non-synonymous variants were analyzed, 10 of which are exclusive in cases and 2 exclusive in controls. The combined sample was formed by combining the two samples together. See notes for table 1 for abbreviation detail.