Table 3.
Relative differences in cytokine amounts between L. plantarum WCFS1 wild-type and deletion mutants.
| IL-10c | IL-12 | IL-10/IL-12 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Mutant comparisona |
Growth phaseb |
value |
p-value |
adj. p- value |
value |
p-value |
adj. p- value |
value |
p-value |
adj. p- value |
| lp_1953 | log | 0.097 | 0.461 | 0.830 | -0.041 | 0.775 | 0.825 | 0.138 | 0.161 | 0.803 |
| stat | 0.253 | 0.057 | 0.228 | -0.043 | 0.761 | 0.825 | 0.296 | 0.003 | 0.024 * | |
| pts19ADCBR | log | 0.164 | 0.216 | 0.647 | 0.106 | 0.458 | 0.825 | 0.058 | 0.556 | 0.923 |
| stat | 0.396 | 0.004 | 0.031 * | -0.131 | 0.371 | 0.825 | 0.529 | 0.000 | 0.000 *** | |
| plnEFI | log | 0.287 | 0.031 | 0.176 | 0.032 | 0.825 | 0.825 | 0.255 | 0.010 | 0.071 |
| stat | 0.344 | 0.010 | 0.071 | 0.174 | 0.225 | 0.825 | 0.170 | 0.084 | 0.507 | |
| plnG | log | 0.280 | 0.035 | 0.176 | -0.070 | 0.625 | 0.825 | 0.350 | 0.000 | 0.005 ** |
| stat | -0.028 | 0.830 | 0.830 | -0.146 | 0.307 | 0.825 | 0.118 | 0.230 | 0.921 | |
| lamA lamR | log | 0.511 | 0.000 | 0.001 *** | 0.199 | 0.165 | 0.825 | 0.312 | 0.002 | 0.016 * |
| stat | 1.331 | 0.000 | 0.000 *** | 1.321 | 0.000 | 0.000 *** | 0.009 | 0.923 | 0.923 | |
a L. plantarum WCFS1 deletion mutant measured in the PBMC assay.
b Phase of growth from which L. plantarum cells were harvested (log = exponential phase; stat = stationary phase).
c The value is the average difference in 2Log cytokine amounts induced by wild-type L. plantarum and mutant cells harvested in the same phase of growth (log or stat). A positive value indicates an increase in IL-10 levels produced by PBMCs in response to mutant L. plantarum compared to the wild-type cells. Calculations of t-test p-values and adjusted (adj.) p-values are described in the text (Materials and Methods). * (0.01 < p < 0.05); ** (0.002 < p < 0.01); *** (p < 0.002) for the adj. p-values.