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. 2010 Sep 21;38(22):8149–8163. doi: 10.1093/nar/gkq804

Table 5.

Distribution and Density (D) of GQS motifs in Arabidopsis genic RNA

GQS Motif Genica
Codingb
5′-UTRc
3′-UTRd
Introne
GQS Df GQS Df %g GQS Df %g GQS Df %g GQS Df %g
G3+L1–7 225 2.9 174 4.3 77 10 2.6 4 14 2.2 6 27 1.0 12
G3+L1–3 43 0.6 28 0.7 65 4 1.1 9 4 0.6 9 7 0.3 16
G2+L1–4 19 985 257.8 17 989 443.1 90 417 110.0 2 657 105.5 3 922 34.3 5
G2+L1–2 5435 71.1 4897 120.6 90 124 32.7 2 128 20.5 3 286 10.6 5
G2+L1 3496 45.1 3174 78.2 91 74 19.5 2 63 10.1 2 185 6.9 5

Provided are distribution and density of GQS in different regions of the genes from all gene models.

aGenic region is comprised of bcoding, c5′-UTR, d3′-UTR and eIntron. fGQS density is defined as the total number of GQS per Megabase in the specified region. Number of megabases per region: genic region 74.65 Mb, CDS 39.59 Mb, 5′-UTR 3.62 Mb, 3′UTR 6.02 Mb and intron 25.43 Mb. gPercentages were calculated relative to the genic region. Raw numbers (GQS), GQS densities (D) and percentages (%) of GQS. Quadparser search parameters were set to include only G-patterns, which will be found in RNA, and exclude C-patterns.