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. 2010 Aug 17;28(1):17–20. doi: 10.1093/molbev/msq220

Table 1.

Autonomous and Nonautonomous Families of Vingi non-LTR Retrotransposons in the Erinaceus europaeus Genome.

Name Length (bp) Copy number of full-length copies Corresponding positions in Vingi-1_EE Average identity ± standard deviationa
Vingi-1_EE 3085 242 1-3085 0.9782 ± 0.0058
Vingi-1N1_EE 102 92 1-80, 3062-3085 0.9758 ± 0.0154
Vingi-1N2_EE 403 20 1-129, 2820-3082 0.9882 ± 0.0715
Vingi-1N3_EE 195 6273 1-149, 3036-3081 0.9751 ± 0.0003
Vingi-1N4_EE 574 101 1-170, 2679-3085 0.9723 ± 0.0141
Vingi-1N5_EE 628 106 1-211, 2669-3085 0.9731 ± 0.0131
Vingi-1N6_EE 339 12 1-209, 2953-3082 0.9758 ± 0.1151
Vingi-1N7_EE 874 8 1-212, 2324-2405, 2502-3081 0.9777 ± 0.1729
Vingi-1N8_EE 680 12 1-222, 2625-3082 0.9743 ± 0.1149
Vingi-1N9_EE 619 5 1-243, 2709-3084 0.9814 ± 0.2776
Vingi-1N10_EE 730 12 1-271, 2623-3081 0.9838 ± 0.1159
Vingi-1N11_EE 675 8 3-321, 2726-3080 0.9849 ± 0.1741
a

CpG dinucleotides, prone to quick decay to TpG and CpA, in the consensus sequences were excluded in calculations of identity.