Table 1.
Split-inteins commonly used for PTSa
Sizeb | Half- life c (min) |
Comments | ||
---|---|---|---|---|
IntN | IntC | |||
Naturally split inteins | ||||
Ssp DnaE | 123 | 36 | 35–175 | One of the better studied and broadly used split inteins. Requires three native extein residues (Cys-Phe-Asn) at the C-terminal junction. IntC is accessible to SPPSd. |
Npu DnaE e | 102 | 36 | ~1 | Most efficient split intein described so far. Active with a broad set of residues at the splicing junction. IntC is accessible to SPPS. |
Artificially split inteins | ||||
Mtu RecA | 105 | 38 | 60–120 | Reconstitution of the active intein requires co-refolding of previously denatured fragments. |
Sce VMA | 184 | 55 | 6 | Requires induced fragment complementation by auxiliary dimerization domains. Has been used to control protein function in conditional protein splicing systems in vivo and in vitro. |
Ssp DnaB-S0 f | 104 | 47 | 12 | Active under native conditions. Ser-Gly required at the N-terminal junction. |
Ssp DnaB-S1 f | 11 | 143 | 280 | The short IntN is amenable to SPPS and has been used for the labeling of protein N-termini. Same sequence requirements than as DnaB-S0. |
Ssp GyrB-S11 f | 150 | 6 | 170 | Active under native conditions. Ser-Ala-Asp used at the N-terminal junction. |
Ssp: Synechotcystis sp.; Npu: Nostoc punctiforme; Sce: Saccharomyces cerevisiae; Mtu: Mycobacterium tuberculosis. (Mootz, 2009) and references therein.
Number of residues.
Half-lives calculated from reported first order rate constants.
Solid-phase peptide synthesis.
Artificial variants of the Npu DnaE, with shorter IntC (15 and 6 residues), have been designed by shifting the split site closer to the C-terminus.
S0, S1 and S11 indicate the site at which the intein is split. S0 corresponds to the split site of naturally split inteins.