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. 2010 Dec 20;5(12):e14147. doi: 10.1371/journal.pone.0014147

Table 4. Average performance measures for different network computed using correlation reconstructions for thresholds 0 (REL), 0.4 and 0.8 with standard deviations in parentheses.

Measures Inline graphic Inline graphic Inline graphic Inline graphic Inline graphic Inline graphic
AUPR 0.26(0.06) 0.19(0.07) 0.05(0.02) 0.24(0.06) 0.20(0.06) 0.06(0.01)
AUROC 0.74(0.02) 0.61(0.04) 0.51(0.01) 0.70(0.04) 0.61(0.03) 0.51(0.00)
Pr1Rec 0.73(0.30) 0.73(0.30) 0.38(0.43) 0.84(0.36) 0.84(0.36) 0.84(0.36)
Pr10Rec 0.67(0.18) 0.67(0.17) 0.05(0.01) 0.73(0.15) 0.73(0.15) 0.05(0.01)
Pr50Rec 0.16(0.04) 0.06(0.01) 0.04(0.01) 0.11(0.03) 0.06(0.01) 0.04(0.01)
Pr80Rec 0.06(0.00) 0.04(0.01) 0.04(0.01) 0.05(0.01) 0.04(0.01) 0.04(0.01)
AUPR score 45.53 30.75 2.30 39.12 32.02 3.24
AUROC score 17.75 5.63 0.45 13.48 5.84 0.52
Overall score 31.64 18.19 1.38 26.30 18.93 1.88

Pr1Rec, Pr10Rec, Pr50Rec, Pr80Rec represent precision at 1%, 10%, 50%, and 80% recall when all (100) and only half of the perturbations (50) are considered.