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. 2011 Jan;25(1):206–218. doi: 10.1096/fj.10-166926

Table 1.

Primers utilized for ChIP qPCR

Primer Sequence
1.9 kb US of TSS
    Upper TCAAAAATCAAATAGCACCC
    Lower CCAATTCATGTTAATGCCC
1.2 kb US of Sox21 TSS
    Upper CTTTGAGTGCAGGTTTAGGC
    Lower TGTACCGCTTTCATCCTCC
Sox21 TSS
    Upper AAAATCCTCTCCGGGACCCT
    Lower CTCCGCCGCTCAACTTTCG
250 bp DS of Sox21 TSS
    Upper CGGTACTTGTAGTCGGGATG
    Lower GAAGATGGCCCAGGAGAACCC
1.4 kb DS of Sox21 TSS
    Upper TCATCTCTCATATACAGGCCG
    Lower TTGCTTTTTGCGTCTCATCC
Sox21 HMG/POU cassette primers
    Upper CTTCATCCTTACCTTTCCCAT
    Lower AAACTGAATGACAAAGCGG
Oct4 control region primers (∼3 kb US of Oct4 TSS)
    Upper ATAGGTGTGGCATTCCGCAT
    Lower ACCACCTGTATTTTAGAACCA