Table 1.
Primers utilized for ChIP qPCR
Primer | Sequence |
---|---|
1.9 kb US of TSS | |
Upper | TCAAAAATCAAATAGCACCC |
Lower | CCAATTCATGTTAATGCCC |
1.2 kb US of Sox21 TSS | |
Upper | CTTTGAGTGCAGGTTTAGGC |
Lower | TGTACCGCTTTCATCCTCC |
Sox21 TSS | |
Upper | AAAATCCTCTCCGGGACCCT |
Lower | CTCCGCCGCTCAACTTTCG |
250 bp DS of Sox21 TSS | |
Upper | CGGTACTTGTAGTCGGGATG |
Lower | GAAGATGGCCCAGGAGAACCC |
1.4 kb DS of Sox21 TSS | |
Upper | TCATCTCTCATATACAGGCCG |
Lower | TTGCTTTTTGCGTCTCATCC |
Sox21 HMG/POU cassette primers | |
Upper | CTTCATCCTTACCTTTCCCAT |
Lower | AAACTGAATGACAAAGCGG |
Oct4 control region primers (∼3 kb US of Oct4 TSS) | |
Upper | ATAGGTGTGGCATTCCGCAT |
Lower | ACCACCTGTATTTTAGAACCA |