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. 2010 Sep 17;19(11):2186–2195. doi: 10.1002/pro.504

Table IV.

Contributions Made by the Hydrophobic and Hydrophilic Non-hydrogen Atoms to the SASA (nm2) and the rgyr (nm) of the Different α- and β-peptide Systems Described in Table II During 10 ns of MD Simulation with the 53A6 GROMOS Force Field7

SASA(Whole Peptide)
SASA(Per Atoma)
Peptide Hydrophobic Hydrophilic Total Hydrophobic Hydrophilic Total rgyr
αMO— 9.42 3.72 13.14 0.39 0.22 0.32 0.40
αMOH 9.78 3.15 12.93 0.41 0.19 0.32 0.40
αWO— 6.70 2.20 8.89 0.28 0.13 0.22 0.40
αWOH 6.87 1.88 8.75 0.29 0.11 0.21 0.40
βMO— 10.03 2.03 12.06 0.42 0.16 0.33 0.35
βMOH 10.26 1.91 12.18 0.43 0.15 0.33 0.35
βWO— 6.59 1.47 8.06 0.27 0.11 0.22 0.35
βWOH 6.81 1.29 8.10 0.28 0.10 0.22 0.35
a

The α- and β-peptides both have 24 hydrophobic atoms. The α-peptide has 17 hydrophilic atoms and the β-peptide 13.