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. 2010 Sep 17;19(11):2186–2195. doi: 10.1002/pro.504

Table VIII.

Final Values of the Schlitter Entropy Inline graphic (kJ mol −1 K −1) and Inline graphic (kJ mol −1) Calculated for the C α Atoms and the Sum and Average of the rms Fluctuations of all Dihedral Angles (degrees) for Each of the Different α- and β-Peptide Systems Described in Table II During 10 ns of MD Simulation with the 53A6 GROMOS Force Field7

Inline graphic
rmsf of Dihedral Angles
Peptide Per atoma Total Inline graphic Sum Averageb
αMO— 11.6 93.1 27930 401 19
αMOH 11.3 90.1 27030 269 13
αWO— 11.5 92.3 27690 354 17
αWOH 11.4 90.9 27270 251 12
βMO— 9.5 56.9 17070 348 25
βMOH 9.5 56.8 17040 223 16
βWO— 9.7 58.4 17520 305 22
βWOH 9.7 58.3 17490 205 15
a

The α-peptides have eight Cα atoms and β-peptides have six Cα atoms

b

The average is over the total number of dihedral angles in each molecule. Only the φ, ψ and, for the β-peptides, θ backbone dihedral angles were considered, as the ω angles are essentially constant.