Table 2.
Mouse homologs by protein sequence homology
| Worm transcript | Mouse gene | Gene synonyms | Description | E value | R BLASTP |
|---|---|---|---|---|---|
| unc-30 | Pitx1 | Bft, Potx, Ptx1 | Pituitary homeobox 1 (Paired-like homeodomain transcription factor 1) (Homeobox protein P-OTX) (Pituitary OTX-related factor) (Hindlimb-expressed homeobox protein backfoot) | 3.9E-28 | Yes |
| Pitx2 | Arp1, Brx1, Otlx2, Ptx2, Rgs | Pituitary homeobox 2 (Paired-like homeodomain transcription factor 2) (Homeobox protein PITX2) (Orthodenticle-like homeobox 2) (Solurshin) (ALL1-responsive protein ARP1) (BRX1 homeoprotein) (Paired-like homeodomain transcription factor Munc 30) | 4.8E-28 | Yes | |
| Pitx3 | Pituitary homeobox 3 (Paired-like homeodomain transcription factor 3) (Homeobox protein PITX3) | 1.2E-26 | Yes | ||
| fkh-10 | Foxb2 | Fkh4 | Forkhead box protein B2 (Transcription factor FKH-4) | 2.6E-27 | No |
| FoxL1 | Fkh6, Fkhl11 | Forkhead box protein L1 (Forkhead-related protein FKHL11) (Transcription factor FKH-6) | 4.2E-27 | No | |
| Foxa1 | Hnf3a, Tcf-3a, Tcf3a | Hepatocyte nuclear factor 3-alpha (HNF-3A) (Forkhead box protein A1) | 6.2E-27 | No | |
| Foxb1 | Fkh5, Foxb1a, Foxb1b, Mf3 | Forkhead box protein B1 (Transcription factor FKH-5) | 1.1E-26 | No | |
| Foxi2 | Forkhead box protein I2 | 1.2E-26 | No | ||
| Foxd2 | Mf2 | Forkhead box protein D2 (Mesoderm/mesenchyme forkhead 2) | 1.8E-26 | No | |
| Foxq1 | Hfh1, Hfh1l | Forkhead box protein Q1 (Hepatocyte nuclear factor 3 forkhead homolog 1) (HNF-3/forkhead-like protein 1) (HFH-1l) | 6.5E-26 | No | |
| Foxa3 | Hnf3g, Tcf-3g, Tcf3g | Hepatocyte nuclear factor 3-gamma (Forkhead box protein A3) | 7.4E-26 | No | |
| bar-1 | Jup | Junction plakoglobin (Desmoplakin-3) (Desmoplakin III) | 5.2E-43 | No | |
| Ctnnb1 | Catnb | Catenin beta-1 (Beta-catenin) | 1.1E-42 | No | |
| F30A10.3 | Ip6k1 | Ihpk1 | Inositol hexakisphosphate kinase 1 (Inositol hexaphosphate kinase 1) | 3.7E-54 | Yes |
| Ip6k2 | Ihpk2 | Inositol hexakisphosphate kinase 2 (P(i)-uptake stimulator/PiUS) | 1.6E-48 | Yes | |
| Ip6k3 | Ihpk3 | Inositol hexakisphosphate kinase 3 (Inositol hexaphosphate kinase 3) | 5.9E-48 | Yes | |
| Ipmk | Impk | Inositol polyphosphate multikinase (Inositol 1,3,4,6-tetrakisphosphate 5-kinase) | 1.4E-08 | No | |
| alr-1 | Phox2a | Arix, Phox2, Pmx2, Pmx2a | Paired mesoderm homeobox protein 2A (Paired-like homeobox 2A) (PHOX2A homeodomain protein) (Aristaless homeobox protein homolog) | 5.6E-28 | No |
| Arx | Homeobox protein ARX (Aristaless-related homeobox) | 5.9E-28 | Yes | ||
| Alx4 | Homeobox protein aristaless-like 4 (ALX-4) | 5.1E-26 | Yes | ||
| Phox2b | Pmx2b | Paired mesoderm homeobox protein 2B (Paired-like homeobox 2B) (PHOX2B homeodomain protein) (Neuroblastoma Phox/NBPhox) | 3.6E-25 | No | |
| Pax7 | Pax-7 | Paired box protein Pax-7 | 6.7E-25 | No | |
| ceh-27 | Nkx2-5 | Csx, Nkx-2.5, Nkx2e | Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac-specific homeobox) (Homeobox protein CSX) | 3.6E-22 | No |
| Nkx2-3 | Nkx-2.3, Nkx2c | Homeobox protein Nkx-2.3 (Homeobox protein NK-2 homolog C) (Nkx2-C) (Homeobox protein NK-2 homolog 3) | 6.0E-20 | No | |
| Nkx2-1 | Nkx-2.1, Titf1, Ttf1 | Homeobox protein Nkx-2.1 (Thyroid transcription factor 1/TTF-1) (Thyroid nuclear factor 1) | 2.1E-18 | No | |
| Nkx2-4 | Nkx2d | Homeobox protein Nkx-2.4 (Homeobox protein NK-2 homolog D) | 2.2E-18 | No | |
| nhr-47 | Hnf4g | Nr2a2 | Hepatocyte nuclear factor 4-gamma/HNF-4-gamma (Nuclear receptor subfamily 2 group A member 2) | 7.7E-35 | No |
| Hnf4a | Hnf-4, Hnf4, Nr2a1, Tcf14 | Hepatocyte nuclear factor 4-alpha/HNF-4-alpha (Transcription factor HNF-4) (Nuclear receptor subfamily 2 group A member 1) (Transcription factor 14) | 7.4E-34 | No | |
| nhr-190 | Hnf4a | Hnf-4, Hnf4, Nr2a1, Tcf14 | Hepatocyte nuclear factor 4-alpha/HNF-4-alpha (Transcription factor HNF-4) (Nuclear receptor subfamily 2 group A member 1) (Transcription factor 14) | 2.3E-12 | No |
| Hnf4g | Nr2a2 | Hepatocyte nuclear factor 4-gamma/HNF-4-gamma (Nuclear receptor subfamily 2 group A member 2) | 7.1E-12 | No | |
| Rarg | Nr1b3 | Retinoic acid receptor gamma/RAR-gamma (Nuclear receptor subfamily 1 group B member 3) | 1.1E-09 | No | |
| F53H10.2 | Znf541 | Ship1, Zfp541 | Zinc finger protein 541 (Spermatogenic cell HDAC-interacting protein 1) | 4.2E-31 | Yes |
| Trerf1 | Transcriptional-regulating factor 1 (Transcriptional-regulating protein 132) (Zinc finger transcription factor TReP-132) | 1.4E-28 | Yes | ||
| C130039O16Rik | Putative uncharacterized protein | 1.2E-17 | Yes | ||
| Mier1 | Kiaa1610 | Mesoderm induction early response protein 1/Mi-er1 | 2.7E-04 | No | |
| Rcor1 | D12Wsu95e, Kiaa0071 | REST corepressor 1 (Protein CoREST) | 2.7E-04 | No | |
| Foxj3 | Kiaa1041 | Forkhead box protein J3 | 4.3E-03 | No | |
| Ncor1 | Rxrip13 | Nuclear receptor corepressor 1/N-CoR1/N-CoR (Retinoid X receptor-interacting protein 13/IP13) | 6.7E-03 | No | |
| mes-2 | Ezh2 | Enx1h | Histone-lysine N-methyltransferase EZH2 (Enhancer of zeste homolog 2) (ENX-1) | 3.0E-60 | Yes |
| Ezh1 | Enx2 | Histone-lysine N-methyltransferase EZH1 (Enhancer of zeste homolog 1) (ENX-2) | 8.2E-56 | Yes | |
| Suv39h1 | Suv39h | Histone-lysine N-methyltransferase SUV39H1 (Suppressor of variegation 3-9 homolog 1) (Position-effect variegation 3-9 homolog) (Histone H3-K9 methyltransferase 1) (H3-K9-HMTase 1) | 5.1E-13 | No | |
| taf-11.1 | Taf11 | Transcription initiation factor TFIID subunit 11 (Transcription initiation factor TFIID 28 kDa subunit/TAF(II)28/TAFII-28/TAFII28) (TFIID subunit p30-beta) | 3.0E-24 | Yes | |
| Dspp | Dmp3 | Dentin sialophosphoprotein precursor (Dentin matrix protein 3/DMP-3) [Cleavage products: Dentin phosphoprotein (Dentin phosphophoryn/DPP); Dentin sialoprotein/DSP] | 1.3E-04 | No | |
| Myst3 | Moz | Histone acetyltransferase MYST3 (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) | 6.4E-04 | No | |
| nhr-4 | Hnf4a | Hnf-4, Hnf4, Nr2a1, Tcf14 | Hepatocyte nuclear factor 4-alpha/HNF-4-alpha (Transcription factor HNF-4) (Nuclear receptor subfamily 2 group A member 1) (Transcription factor 14) | 1.7E-35 | No |
| Hnf4g | Nr2a2 | Hepatocyte nuclear factor 4-gamma/HNF-4-gamma (Nuclear receptor subfamily 2 group A member 2) | 1.5E-31 | No | |
| Rxrb | Nr2b2 | Retinoic acid receptor RXR-beta (Retinoid X receptor beta) (Nuclear receptor subfamily 2 group B member 2) (MHC class I regulatory element-binding protein H-2RIIBP) | 2.8E-27 | No | |
| ceh-44 | Cux1 | Cutl1, Cux, Kiaa4047 | Homeobox protein cut-like 1 (CCAAT displacement protein/CDP) (Homeobox protein Cux) | 8.3E-75 | Yes |
| Cux2 | Cutl2 | Homeobox protein cut-like 2/Cut-like 2 (Homeobox protein Cux-2) | 3.5E-61 | Yes | |
| Cux1 | Cutl1 | Protein CASP | 1.9E-39 | Yes | |
| Myh8 | Myhsp | Myosin-8 (Myosin heavy chain 8) (Myosin heavy chain, skeletal muscle, perinatal/MyHC-perinatal) | 9.1E-16 | No | |
| Myh10 | Myosin-10 (Myosin heavy chain 10) (Myosin heavy chain, non-muscle IIb) (Non-muscle myosin heavy chain IIb) (Cellular myosin heavy chain, type B) (Non-muscle myosin heavy chain B) | 1.3E-15 | No | ||
| Clip1 | Kiaa4046, Rsn | CAP-Gly domain-containing linker protein 1 (Restin) | 6.0E-15 | No | |
| Myh11 | Myosin-11 (Myosin heavy chain 11) (Myosin heavy chain, smooth muscle isoform) (SMMHC) | 7.3E-14 | No | ||
| mdt-6 | Med6 | Mediator of RNA polymerase II transcription subunit 6 (Mediator complex subunit 6) | 1.7E-25 | Yes | |
| Rpgrip1 | X-linked retinitis pigmentosa GTPase regulator-interacting protein 1/RPGR-interacting protein 1 | 5.6E-04 | No | ||
| Sptbn1 | Spectrin beta chain, brain 1 (Spectrin, non-erythroid beta chain 1) (Beta-II spectrin) (Fodrin beta chain) (Embryonic liver fodrin) | 7.5E-03 | No | ||
| Ncl | Nuc | Nucleolin (Protein C23) | 8.4E-03 | No | |
| Pnn | Pinin | 8.5E-03 | No | ||
| aly-2 | Thoc4 | Aly, Ref1, Refbp1 | THO complex subunit 4/Tho4 (Ally of AML-1 and LEF-1) (Transcriptional coactivator Aly/REF) (RNA and export factor-binding protein 1) (REF1-I) | 1.3E-20 | Yes |
| Refbp2 | Ref2 | RNA and export factor-binding protein 2 | 1.6E-14 | Yes | |
| Fox1 | A2bp, A2bp1 | Fox-1 homolog A (Ataxin-2-binding protein 1) | 2.0E-03 | No | |
| Hist1h1a | H1f1 | Histone H1.1 (H1 VAR.3/H1a) | 2.0E-03 | No | |
| mdt-8 | Ezh2 | Enx1h | Histone-lysine N-methyltransferase EZH2 (Enhancer of zeste homolog 2) (ENX-1) | 2.4E-61 | No |
| Med8 | Mediator of RNA polymerase II transcription subunit 8 (Mediator complex subunit 8) (Activator-recruited cofactor 32 kDa component/ARC32) | 2.7E-23 | Yes | ||
| Pou6f2 | POU domain, class 6, transcription factor 2 | 1.1E-03 | No | ||
| hlh-11 | Tcfap4 | Ap4 | Activator protein 4 (Putative uncharacterized protein) (Transcription factor AP4) | 1.5E-17 | Yes |
| Hey2 | Chf1, Herp, Herp1, Hesr2, Hrt2 | Hairy/enhancer-of-split related with YRPW motif protein 2 (Hairy and enhancer of split-related protein 2/HESR-2) (Hairy-related transcription factor 2/mHRT2) (HES-related repressor protein 2) (Protein gridlock homolog) | 3.4E-07 | No |