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. Author manuscript; available in PMC: 2011 Jul 1.
Published in final edited form as: J Struct Biol. 2010 Jun 8;173(1):86–98. doi: 10.1016/j.jsb.2010.06.006

Table 2.

Data collection and refinement statistics.

AtMTAN1-SAH
Diffraction statistics
Space group P21
Unit cell dimensions (Å)
a 45.9
b 126.4
c 83.8
β (°) 101.7
No. observed reflections 173,922
No. unique reflections 46,037
Resolution range (Å) 23.12–2.20
Rmerge(%)a 8.4 (28.9)
Redundancy 3.8
Completeness (%) 97.2 (95.2)
Average (I/σI) 7.4 (3.0)
Refinement statistics
No. of protein atoms 7524
No. of ligand atoms 68
No. of water molecules 519
Resolution range (Å) 23.12–2.20
No. reflections in test set 4627
Test set size (%) 10
Rcryst(%)b 20.8
Rfree(%)c 26.2
Overall B factor (Å2) 22.6
 Ligands 20.0
 Water 23.1
R.m.s. deviation
 Bonds (Å) 0.012
 Angles (°) 1.4
 Dihedral angles (°) 24.5
 Improper angles (°) 3.0
Molprobity output scores (%)e
 Ramachandran favored 98.1
 Ramachandran outliers 0.0
Cruickshank’s DPI based on Rfreed 0.26

Values given in parentheses refer to reflections in the outer resolution shell: (2.28–2.20 Å).

a

Rmerge = ΣΣ| I(k) − 〈I〉|/ΣI(k), where I(k) and 〈I〉 represent the diffraction intensity values of the individual measurements and the corresponding mean values. The summation is over all unique measurements.

b

Rcryst=FobskFcalcFobs, where Fobs and Fcalc are the observed and calculated structure factors, respectively.

c

Rfree is the sum extended over a subset of reflections (10%) excluded from all stages of the refinement.

d

Cruickshank’s diffraction component precision index (DPI) as an estimate of coordinate error (Cruickshank, 1999).

e

As calculated using Molprobity (Lovell et al., 2003).