TABLE 1.
Target fragment of spaC | Primerb | Sequence (5′-3′) |
---|---|---|
Fragment encoding the full length | Er-1F | AGGATCCATGAAAAAGAAAAAACACCTATTTCCGAAAGTA |
Er-2R | GAAGCTTCTATTTTAAACTTCCATCGTTCTTAAATGCATA | |
Fragment encoding the N-terminal end | Er-1F | AGGATCCATGAAAAAGAAAAAACACCTATTTCCGAAAGTA |
Er-3R | CGGTTTCTTTTGATCACCCGGT | |
Fragment encoding the C-terminal end | Er-4F | TGTTGGATCCCCTGAAAGTCCTATTAAAGTA |
Er-5R | CTGTCTCGAGTTTTAAACTTCCATCGTTCTT |
All PCRs were started by initial denaturing at 94°C for 3 min, followed by 25 cycles of denaturation at 94°C for 45 s, annealing at 55°C for 1 min, and extension at 72°C for 2 min, with a final extension step at 72°C for 5 min. Primers were designed on the basis of spaC nucleotide sequence of E. rhusiopathiae strain 715 (serovar 18; GenBank accession number AB238210).
F, forward; R, reverse.