Table 1. Sequences and individual MASCOT scores of XopD peptides identified by Nano LC/ESI MS/MS analysis after trypsin digestion.
Peptide sequencea , b | MASCOT score |
IFNFDYK | 35 |
EMTEAADDYR | 69 |
ENHGAGYNMHPLLESLPR | 38 |
RNPTQVHADGSVHQMR | 60 |
ILELISAYGDGK | 107 |
GIPELQR | 24 |
QMLQELNEDQR | 68 |
DQVIHQIIR | 50 |
RIEYCADPEYR | 34 |
EVALSR | 25 |
ITLSQR | 29 |
AKAEAEAEAK | 21 |
INEIMEYIPR | 77 |
YEALEK | 22 |
GDGSFGPGLPGILR | 52 |
YMTPDQK | 20 |
LYLASER | 28 |
KLALAAPK | 53 |
TLHQKPNLLLEISSK | 26 |
LGEAVISGASQGIQTAIR | 117 |
AWPAQPEASSSTFDDLESLDYR | 90 |
IDVDNLPSPQDVADPELPPVR | 80 |
ATSWLLDGHLR | 64 |
AYTDDLAR | 49 |
NKDAVAAYHYDSMAQK | 24 |
VLDGTFDYAGGR | 77 |
DLTDIEPDR | 22 |
LAQAEQAPAESSIR | 82 |
The first 13 peptides are present in the XopD N-terminal extension.
The starting M residue for the XopD protein annotated in the public databases in underlined in the INEIMEYIPR peptide.