Table 2. Sequences and individual MASCOT scores of XopD peptides identified by Nano LC/ESI MS/MS analysis after digestion with the V8 protease.
Peptide sequencea ,b | MASCOT score |
MDRIFNFD | 25 |
YKKYREMTE | 20 |
NHGAGYNMHPLLE | 25 |
LQRSFPSFAAFLMD | 41 |
YCADPEYRE | 28 |
VALSRLE | 37 |
SDCSGKITLSQRTLD | 49 |
YIPRYE | 22 |
LTRLGE | 30 |
SLDYRQNYGYRE | 22 |
LPPVRATSWLLD | 26 |
AVAAYHYD | 30 |
SMAQKDPQQRYLAD | 23 |
MAAYHLGLDYQQTHE | 29 |
VLAHRVLD | 39 |
The first 8 peptides are present in the XopD N-terminal extension.