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. 2010 Jan 18;11(Suppl 1):S65. doi: 10.1186/1471-2105-11-S1-S65

Table 1.

Performance statistics of classification models based on 10-fold cross validation

Method 10-fold cross-validation test result, 39 features, Promoters = 8793, NonPromoters = 34686

# of true positive # of false negative # of true negative # of false positive Sensitivity (%) Positive predictive value (PPV) Mathew correlation coefficient True positive cost ROC Area
Bagging 7603 1190 34354 332 86.47 95.82 0.89 0.04 0.97

LogitBoost 7638 1155 34252 434 86.86 94.62 0.88 0.06 0.97

Random Forest 7626 1167 34921 395 86.73 95.08 0.89 0.05 0.97

Rotational Forest 7153 1640 34198 488 81.35 93.61 0.84 0.07 0.96