Fig. 6.

Extended target site motifs by nucleosome occupancy. (A) Nucleotide frequency distributions in 1-kb regions surrounding all in vivo and all in vitro target sites recovered in this study. (B) Nucleotide frequency distribution in the 500 bp flanking the midpoint of all Hermes target sites found in NFRs (Left), regions of intermediate nucleosome occupancy (IOR) (Center), and nucleosome occupied regions (NOR) (Right) as defined in Fig. S2. (C) Corresponding nucleotide frequency distribution of 500 bp defining NFRs, IORs, and NORs in the yeast genome.