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. 2010 Dec 28;5(12):e15906. doi: 10.1371/journal.pone.0015906

Table 1. Molecular consensus defining fertility the restorer protein structural patterns.

Molecular consensus Name of sequence consensus Code of consensus
[LIVMFGA] - E - [LIMSTAC] - [GS] - G - [KNLM] - [SADN] - [TAPFV] ALDH_GLU_active site PS00687
[FYLVA] - x - {GVEP} - {DILV} - G - [QE] - {LPYG} - C - [LIVMGSTANC] - [AGCN] - {HE} - [GSTADNEKR] ALDH_CYS_active site PS00070
Pentatricopeptide (PPR) repeat profile PS51375
Arg repeat regions Arginine-rich region profile PS50323
Pro repeat regions Proline-rich region profile PS50099
NB-ARC PF00931
[AG] - x(4) - G - K - [ST] ATP/GTP-binding site motif A (P-loop) PS00017
TIR domain PS50104
L - x(6) - L - x(6) - L - x(6) – L Leucine zipper pattern PS00029
Folylpolyglutamate synthase signature 1 [LIVMFY] - x - [LIVM] - [STAG] - G - T - [NK] - G - K - x - [STG] - x(4) - {A} - x - {EAD} - [LIVM](2) - x(3,4) - [GSKQT] UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase (Mur ligase) PS01011
Folylpolyglutamate synthase signature 2 [LIVMFY](2) - [EK] - x - G - [LIVM] - [GA] - G - x(2) - D - x - [GST] - x - [LIVM](2) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase (Mur ligase) PS01012
[GSAT] - [KRHPSTQVME] - [LIVMFY] - x - [LIVMF] - [IVC] - [DN] - [LS] - [AH] - G - [SAN] – E Kinesin motor domain PS50067
[GSTALIVN] - {PCHR} - {KND} - H - E - [LIVMFYW] - {DEHRKP} - H - {EKPC} - [LIVMFYWGSPQ] Neutral zinc metallopeptidases, zinc-binding region signature PS00142
xxxxxxxxxxxxxxxxxx--------------xxxxxxxxxxxxxxxxx Myc-type, “helix-loop-helix” domain profile PS50888
Amphipathic helix 1 Loop Amphipathic helix 2
C-X(8)-C-X(2)-CCysteine residues form three intramolecular disulfide bridges: C1-C5, C2-C3, and C4-C6 Ginkbilobin-2 (Gnk2)-homologous domain profile PS51473
[STAGN] - {E} - [STAG] - [LIVMF] - R - L - {LP} - [SAGV] - N - [LIVMT] ATP synthase a subunit PS00449
[GSTA] - R - [NQ] - P - x(5) - {A} - x - {F} - x(2) - [LIVMFYW](2) - x(3) - [LIVMFYW] - x - [DE] ATP synthase c subunit PS00605
P - [SAP] - [LIV] - [DNH] - {LKGN} - {F} - {S} - S - {DCPH} - S ATP synthase alpha/beta subunits PS00152