Table 2. Genes detected by microarray screening as exhibiting significant changes in expression level following treatment of murine retinal progenitor cells (RPCs) with glial cell line-derived neurotrophic factor (GDNF).
Gene symbol* | Gene accession | Gene description | GO_Biological_Process_Term | log2 (fold change)§ | -log10 (p-value)# |
---|---|---|---|---|---|
Olfr988 |
NM_001011534 |
olfactory receptor 988 |
signal transduction;G-protein coupled receptor protein signaling pathway; sensory perception of smell |
2.6 |
1.32 |
Olfr444 |
NM_146656 |
olfactory receptor 444 |
signal transduction;G-protein coupled receptor protein signaling pathway; sensory perception of smell |
−2.39 |
1.62 |
Tex12 |
NM_025687 |
testis expressed gene 12 |
— |
2.04 |
1.33 |
Dnahc7a |
XM_001473948 |
dynein, axonemal, heavy chain 7A |
biological_process |
1.73 |
1.63 |
Olfr1290 |
NM_146262 |
olfactory receptor 1290 |
signal transduction ;G-protein coupled receptor protein signaling pathway; sensory perception of smell |
−1.45 |
1.58 |
Olfr860 |
NM_146528 |
olfactory receptor 860 |
signal transduction;G-protein coupled receptor protein signaling pathway; sensory perception of smell |
−1.43 |
1.92 |
Ear1 |
NM_007894 |
eosinophil-associated, RNase A family, member 1 |
— |
−1.22 |
1.56 |
Olfr486 |
NM_146496 |
olfactory receptor 486 |
signal transduction;G-protein coupled receptor protein signaling pathway; sensory perception of smell; response to stimulus |
1.19 |
1.63 |
BC021785 |
ENSMUST00000095749 |
cDNA sequence BC021785 |
carbohydrate transport |
1.18 |
2.19 |
Vmn2r23 |
NM_001104638 |
vomeronasal 2, receptor 23 |
— |
1.16 |
1.94 |
H2-M10.5 |
NM_177637 |
histocompatibility 2, M region locus 10.5 |
— |
1.16 |
1.52 |
Olfr1221 |
NM_146902 |
olfactory receptor 1221 |
signal transduction;G-protein coupled receptor protein signaling pathway; sensory perception of smell |
1.15 |
1.34 |
Dsg1b |
NM_181682 |
desmoglein 1 beta |
cell adhesion;homophilic cell adhesion |
1.13 |
2.17 |
Mafg |
AK047224 |
v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) |
in utero embryonic development; transcription; regulation of transcription, DNA-dependent;adult behavior;regulation of cell proliferation;regulation of epidermal cell differentiation |
−1.11 |
2.02 |
Fcrls |
NM_030707 |
Fc receptor-like S, scavenger receptor |
— |
1.02 |
3.79 |
Myo9a | ENSMUST00000085572 | myosin IXa | — | −1 | 1.47 |
A combination of p-value<0.05 [equals that –log10(p-value)>1.3] and absolute value of fold change≥2 [equals the absolute value of log2(fold change)≥1] were applied. Totally 24 genes were detected and eight of them are predicted genes for which no biologic functions are known so far (data not shown). *: Gene symbol (Gene name; Affymetrix probe set identification) §: log2(fold change), “#”: “minus values represent the genes that were down regulated in epidermal growth factor (EGF)+ Glial cell line-derived neurotrophic factor (GDNF) compare EGF. Condition of GDNF #: -log10(p-value), p-value, log10 transformed.