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. Author manuscript; available in PMC: 2011 Dec 1.
Published in final edited form as: Prostate. 2010 Dec 1;70(16):1729–1738. doi: 10.1002/pros.21208

Table 2.

Result of meta-analysis for selected SNPs

Chr SNPs Position m/M
alleles
Risk
allele
Fixed effect
Random effect
Heterogeneity
Genetic variation
OR 95% CI OR 95% CI P-valofZ P-valofQ I2 Freq Proportion
2 rs1465618 43,407,453 A/G A 1.11 1.07 – 1.16 1.15 1.04 – 1.26 4.92E-03 8.66E-03 79% 0.212 0.003
2 rs721048 62,985,235 A/G A 1.16 1.11 – 1.22 1.18 1.10 – 1.28 1.22E-05 0.084 44% 0.137 0.002
2 rs12621278 173,019,799 A/G A 1.35 1.27 – 1.44 1.35 1.27 – 1.44 3.36E-19 0.576 0% 0.960 0.003
3 rs2660753 87,193,364 T/C T 1.22 1.14 – 1.31 1.24 1.04 – 1.48 0.015 3.87E-04 84% 0.102 0.003
3 rs10934853 129,521,063 A/C A 1.12 1.08 – 1.16 1.12 1.06 – 1.18 7.43E-05 0.016 53% 0.239 0.002
4 rs17021918 95,781,900 T/C C 1.14 1.10 – 1.18 1.14 1.10 – 1.18 1.54E-15 0.473 0% 0.646 0.003
4 rs7679673 106,280,983 A/C C 1.13 1.10 – 1.17 1.14 1.09 – 1.20 1.29E-07 0.153 47% 0.624 0.003
6 rs9364554 160,753,654 T/C T 1.16 1.10 – 1.21 1.17 1.06 – 1.29 1.91E-03 5.96E-03 76% 0.274 0.004
7 rs6465657 97,654,263 T/C C 1.13 1.08 – 1.18 1.14 1.05 – 1.23 1.42 E-03 0.031 66% 0.509 0.003
8 rs2928679 23,494,920 A/G A 1.09 1.06 – 1.12 1.13 1.02 – 1.25 0.017 3.89E-04 87% 0.456 0.003
8 rs1512268 23,582,408 T/C T 1.17 1.14 – 1.21 1.17 1.12 – 1.23 1.56E-12 0.205 37% 0.420 0.005
8 rs10086908 128,081,119 C/T T 1.13 1.09 – 1.18 1.13 1.08 – 1.19 6.25E-07 0.243 23% 0.625 0.003
8 rs16901979 128,194,098 A/C A 1.80 1.57 – 2.06 1.82 1.44 – 2.30 6.32E-07 0.163 41% 0.031 0.009
8 rs16902094 128,389,528 G/A G 1.21 1.16 – 1.27 1.20 1.12 – 1.30 1.12E-06 0.015 54% 0.271 0.005
8 rs620861 128,404,855 A/G G 1.16 1.11 – 1.20 1.16 1.11 – 1.20 1.18E-13 0.618 0% 0.619 0.004
8 rs6983267 128,482,487 G/T G 1.20 1.14 – 1.26 1.20 1.14 – 1.26 8.13E-12 0.758 0% 0.487 0.006
8 rs1447295 128,554,220 A/C A 1.49 1.40 – 1.57 1.47 1.33 – 1.62 3.82E-14 0.013 57% 0.071 0.008
10 rs10993994 51,219,502 T/C T 1.26 1.22 – 1.31 1.25 1.12 – 1.40 6.80E-05 1.22E-15 91% 0.341 0.009
10 rs4962416 126,686,862 C/T C 1.14 1.09 – 1.20 1.15 1.04 – 1.27 7.85 E-03 1.79E-04 80% 0.257 0.003
11 rs7127900 2,190,150 G/A A 1.25 1.20 – 1.30 1.25 1.20 – 1.30 <1.00E-30 0.713 0% 0.235 0.007
11 rs10896449 68,751,243 A/G G 1.16 1.11 – 1.22 1.16 1.11 – 1.22 8.67E-10 0.898 0% 0.532 0.004
17 rs11649743 33,149,092 A/G G 1.16 1.11 – 1.22 1.16 1.11 – 1.22 1.19E-09 0.922 0% 0.757 0.003
17 rs4430796 33,172,153 A/G A 1.22 1.17 – 1.26 1.22 1.17 – 1.26 1.13E-25 0.645 0% 0.491 0.008
17 rs1859962 66,620,348 G/T G 1.20 1.13 – 1.27 1.21 1.12 – 1.30 7.94E-07 0.214 33% 0.527 0.007
19 rs8102476 43,427,453 T/C C 1.12 1.08 – 1.15 1.12 1.08 – 1.15 2.27E-12 0.729 0% 0.504 0.002
19 rs887391 46,677,464 C/T T 1.14 1.08 – 1.20 1.14 1.08 – 1.20 6.86E-07 0.826 0% 0.757 0.003
19 rs2735839 56,056,435 A/G G 1.30 1.22 – 1.39 1.30 1.11 – 1.51 7.47E-04 6.37E-04 83% 0.863 0.006
22 rs9623117 38,782,065 C/T C 1.12 1.07 – 1.17 1.13 1.05 – 1.22 1.22E-03 0.019 58% 0.221 0.002
22 rs5759167 41,830,156 T/G G 1.18 1.14 – 1.21 1.18 1.14 – 1.21 1.44E-27 0.682 0% 0.549 0.005
23 rs5945619 51,258,412 C/T C 1.26 1.18 – 1.34 1.27 1.12 – 1.43 2.05E-04 0.012 73% 0.385 0.005

m = minor allele, M = major allele; OR and 95% CI were calculated in terms of risk allele; and Freq is the risk allele freq in HapMap.