Table 1.
Methods | hsa-miR-192 | hsa-miR-215 |
---|---|---|
Cross-species comparison | ||
TargetScan 5.1 | + | + |
Miranda | + | + |
DianamicroT 3.0 | − | + |
miRTarget2 | + | + |
Pattern-based (RNA 22) | − | + |
SVM classifier-based (miTarget) | − | + |
Central loop integrating | + | + |
miRNA:target interaction filter | True | False |
Cross-species comparison, pattern-based, SVM classifier–based, or central loop integrating tools were used to predict the presence (+) or absence (−) of miR-192 or miR-215 binding sites in WNK1 3′UTR. Postfitting of the predictions was done according to Yang et al.25