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. 2010 Sep 22;39(Database issue):D1095–D1102. doi: 10.1093/nar/gkq811

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© The Author(s) 2010. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 3. — This example illustrates a putative study of a rice gene (Os10g35050.1) and its predicted orthologs in other species of GreenPhylDB. One ortholog gene is found in sorghum (Sb01g018430.1) and in brachypodium (Super_8.1280_1). The query sequence has also two co-orthologs in Arabidopsis (At1g17810.1 in red, At1g73190.1 in blue) that are cross-linked to Genevestigator expression data tools (v3). Os10g35050.1 is over-expressed at the dough stage while At1g17810.1 and At1g73190.1 are expressed in the silique. This may indicate a role in seed development. Moreover, it might be interesting to note that these genes are all over-expressed under drought conditions or in presence of abscissic acid (ABA). This is consistent with the fact that tonoplast-type aquaporins (TIPs) facilitate osmotic water transport across membranes and it suggests a role in response to drought stress.