Table 3.
Table 3dN/dS Ratios for the 24 Protein-Coding Genes Shared between C. crispus (CC), P. pulvinata (PP), Gr. andersonii (GA), and G. oryzoides (GO)
| Gene | Average dN/dS | CC/GA | GA/GO | GO/PP | CC/GO | CC/PP |
| atp6 | 0.14923 | 0.1222 | 0.1948 | 0.1463 | 0.1211 | 0.1464 |
| atp8 | 0.17942 | 0.1144 | 0.2086 | NA | 0.2092 | NA |
| atp9 | 0.031 | 0.0318 | 0.0581 | 0.04 | 0.0419 | 0.0229 |
| cob | 0.12321 | 0.091 | 0.0913 | 0.1686 | 0.0868 | 0.1444 |
| cox1 | 0.09423 | 0.0744 | 0.0573 | 0.1107 | 0.0724 | 0.1152 |
| cox2 | 0.13519 | 0.0996 | 0.1626 | 0.1501 | 0.1176 | 0.1328 |
| cox3 | 0.14909 | 0.1245 | 0.1074 | 0.1862 | 0.1347 | 0.1673 |
| nad1 | 0.10879 | 0.0911 | 0.1051 | 0.1433 | 0.0862 | 0.088 |
| nad2 | 0.42864 | 0.3198 | 0.6045 | 0.7016 | 0.4609 | 0.2944 |
| nad3 | 0.18078 | 0.1788 | 0.0938 | 0.258 | 0.1591 | 0.1729 |
| nad4 | 0.16722 | 0.1181 | 0.1165 | 0.1956 | 0.1159 | 0.2021 |
| nad4L | 0.18756 | 0.1918 | 0.2048 | 0.2109 | 0.2444 | 0.1646 |
| nad5 | 0.35287 | 0.2902 | 0.1675 | 0.5156 | 0.293 | 0.5299 |
| nad6 | 0.34997 | 0.2493 | 0.1919 | 0.6968 | 0.2177 | 0.6968 |
| rpl16 | 0.3923 | 0.419 | 0.2002 | 1.1754 | 0.3767 | 1.8547 |
| rpl20 | 0.32286 | 0.8087 | 0.1827 | 0.8081 | 0.5991 | 0.3551 |
| rps3 | 0.66532 | 1.5084 | 0.3131 | 0.5835 | 1.4929 | 1.3762 |
| rps11 | 1.72201 | 3.261 | 2.6059 | 4.427 | 1.3158 | 1.8863 |
| rps12 | 0.33198 | 0.6998 | 0.4949 | 1.4743 | 0.2276 | 0.4949 |
| sdhB | 0.12757 | 0.1358 | 0.1094 | 3.3678 | 0.1435 | 3.1396 |
| sdhC | 0.52405 | 0.2853 | 0.4833 | 0.4903 | 0.2246 | 1.2409 |
| sdhD | 0.44802 | 0.3186 | 0.3684 | 0.6144 | 0.37 | 0.4201 |
| secY | 1.19583 | 1.7927 | 0.317 | 2.5772 | 1.5177 | 8.0768 |
| ymf | 0.83624 | NA | NA | 1.5478 | 1.0369 | 0.4958 |
Note.—Average values and pairwise comparisons are given, with values >1 in bold. NA represents missing genes and in cases where pseudogenes were present, sequence preceding a frameshifting indel was used.