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. Author manuscript; available in PMC: 2012 Jan 15.
Published in final edited form as: Biosens Bioelectron. 2010 Sep 15;26(5):2060–2066. doi: 10.1016/j.bios.2010.09.002

Table 1.

PM1 bacterial 16S rDNA sequences used in microarray experiments. The sequence in the target that is complementary to the probe is in boldface. Mismatched base pairs are underlined, while the 5' end of targets used for magnetic labeling and fluorescent labeling is in italic.

Oligonucleotide Sequence
Probe: 5' – NH2 – ACA CGA GCT GAC GAC GGC CAT G – 3'
Perfect Match Target (Magnetic): 3'-TTGTAGAGTGC TGT GCT CGA CTG CTG CCG GTA C GTCGTGGACACAAGA–biotin-5'
Perfect Match Target (Fluorescent): 3'-TTGTAGAGTGC TGT GCT CGA CTG CTG CCG GTA C GTCGTGGACACAAGA–Cy3-5'
2 basepairs Mismatch Target 3'-TTGTAGAGTGC TGT GCT CCA CTG CTC CCG GTA C GTCGTGCACACAAGA–biotin-5'