Table 1. The Set of Transcripts Differentially Expressed by Water Deficit and Associated with the Resveratrol Biosynthetic Pathwaya.
| affy probe set ID | putative function | treatment effect | p-value | adjusted p-valueb | cultivarbtreatment effects | p-value | adjusted p-valueb | cultivarbtreatmentbdevelopment effects | p-value | adjusted p-valueb |
|---|---|---|---|---|---|---|---|---|---|---|
| 1607732_at | chalcone synthase | X | 9.54 × 10−3 | 2.87 × 10−2 | X | 9.54 × 10−3 | 2.87 × 10−2 | − | − | − |
| 1610415_at | cinnamate 3′hydroxylase | X | 1.73 × 10−2 | 4.64 × 10−2 | X | 2.75 × 10−6 | 1.34 × 10−4 | X | 2.25 × 10−6 | 1.08 × 10−3 |
| 1610821_at | cinnamate 4 hydroxylase | − | − | − | X | 2.97 × 10−7 | 2.83 × 10−5 | X | 5.85 × 10−4 | 2.60 × 10−2 |
| 1616191_s_at | cinnamate 4 hydroxylase | − | − | − | X | 4.23 × 10−8 | 6.02 × 10−6 | X | 4.97 × 10−4 | 2.40 × 10−2 |
| 1609307_at | 4 coumaroyl-CoA ligase | − | − | − | X | 1.17 × 10−10 | 4.99 × 10−8 | X | 4.21 × 10−6 | 1.58 × 10−3 |
| 1608094_at | cinnamoyl-CoA reductase | X | 1.42 × 10−3 | 6.13 × 10−3 | X | 1.42 × 10−3 | 6.13 × 10−3 | − | − | − |
| 1619513_at | cinnamoyl-CoA reductase | X | 6.09 × 10−3 | 2.00 × 10−2 | − | − | − | − | − | − |
| 1621163_at | cinnamoyl-CoA reductase | X | 1.47 × 10−4 | 9.30 × 10−4 | − | − | − | − | − | − |
| 1613113_at | phenylalanine ammonia lyase | − | − | − | X | 2.56 × 10−11 | 1.52 × 10−8 | X | 1.42 × 10−5 | 2.98 × 10−3 |
| 1611265_at | 4 Coumarate CoA Ligase | X | 3.48 × 10−4 | 1.90 × 10−3 | − | − | − | − | − | − |
| 1617078_at | resveratrol glucosyl transferase | X | 7.96 × 10−4 | 3.78 × 10−3 | − | − | − | − | − | − |
| 1608009_s_at | stilbene synthase | X | 1.92 × 10−4 | 1.15 × 10−3 | X | 1.55 × 10−10 | 6.27 × 10−8 | − | − | − |
a
X, significantly differentially expressed. −, Not significantly differentially expressed for the treatment effect, cultivar X treatment effects, cultivar X treatment X development effects.
b
Multiple testing correction applied to p-value.