Skip to main content
. 2010 Dec 3;10:310. doi: 10.1186/1471-2180-10-310

Table 1.

Oligonucleotide primers and probes for detection of S. pneumoniae, H. influenzae and N. meningitidis.

Sequence (5' to 3')a Positions in target gene
S. pneumoniae
Spn9802 F 5'-A GTC GTT CCA AGG TAA CAA GTC T-3' 3370-3392
Spn9802 R 5'-AC CAA CTC GAC CAC CTC TTT-3' 3525-3506
Spn9802 FAM 5'-FAM-aTc AGa TTg CTg ATa AAa CgA-BHQ1-'3
H. influenzae
Hi P6 F 5'-CCA GCT GCT AAA GTA TTA GTA GAA G-3' 302-326
Hi P6 R 5'-TTC ACC GTA AGA TAC TGT GCC-3' 477-457
Hi P6 JOE 5'-JOE- CAg ATg CAg TTg AAg GTt Att tAG-BHQ1-'3
N. meningitidis
ctrA F 5'-GCTGCGGTAGGTGGTTCAA-3' 617-635
ctrA R 5'-TTGTCGCGGATTTGCAACTA-3' 727-708
ctrA ROX 5'-ROX-CATTGCCACGTGTCAGCTGCACAT- BHQ1-'3

a Positions with lower case letters indicate locked nucleic acid [27].